Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036O21.3 |
| Conread position: | 1-128 |
| Cow position: | chr24:7917189-7917322 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 2-402 |
| Cow position: | chr24:18390088-18390478 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 3-118 |
| Cow position: | chr24:29538127-29538243 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-128 |
| Cow position: | chr24:17308953-17309078 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 3-128 |
| Cow position: | chr24:27791556-27791675 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 3-128 |
| Cow position: | chr24:36554512-36554638 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-128 |
| Cow position: | chr24:39523260-39523389 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 3-377 |
| Cow position: | chr24:19535063-19535425 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 4-115 |
| Cow position: | chr24:21834775-21834887 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 5-384 |
| Cow position: | chr24:40850375-40849988 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 59, 156 |
| Conread position: | 7-397 |
| Cow position: | chr24:24457057-24457430 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 8-115 |
| Cow position: | chr24:27607927-27608035 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 8-128 |
| Cow position: | chr24:27810333-27810217 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 9-385 |
| Cow position: | chr24:6450692-6450326 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 10-126 |
| Cow position: | chr24:11035330-11035448 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 10-397 |
| Cow position: | chr24:7914191-7913818 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 10-417 |
| Cow position: | chr24:16895243-16895640 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 156, 54 |
| Conread position: | 11-409 |
| Cow position: | chr24:30483763-30484144 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 12-125 |
| Cow position: | chr24:19801019-19800905 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 12-397 |
| Cow position: | chr24:29595620-29595995 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 52, 107 |
| Conread position: | 15-350 |
| Cow position: | chr24:2675513-2675180 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 15-393 |
| Cow position: | chr24:34742926-34742569 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 161, 31 |
| Conread position: | 16-397 |
| Cow position: | chr24:15373604-15373225 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 20-397 |
| Cow position: | chr24:10126051-10125681 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 30-340 |
| Cow position: | chr24:35632143-35631854 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 34-401 |
| Cow position: | chr24:33465437-33465793 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 197-397 |
| Cow position: | chr24:32369905-32370104 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 31, 150 |
| Conread position: | 200-350 |
| Cow position: | chr24:27552905-27552753 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 205-393 |
| Cow position: | chr24:17294186-17294371 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 206-402 |
| Cow position: | chr24:40130132-40129933 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 15, 138 |
| Conread position: | 213-413 |
| Cow position: | chr24:44987379-44987582 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 136 |
| Conread position: | 214-333 |
| Cow position: | chr24:39523454-39523573 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 214-342 |
| Cow position: | chr24:34782793-34782920 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 214-350 |
| Cow position: | chr24:32054656-32054517 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 214-361 |
| Cow position: | chr24:41985991-41985836 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 214-379 |
| Cow position: | chr24:27202595-27202422 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 214-382 |
| Cow position: | chr24:19000042-18999879 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 214-387 |
| Cow position: | chr24:33944396-33944222 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 214-388 |
| Cow position: | chr24:32204800-32204968 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 214-393 |
| Cow position: | chr24:27290866-27290689 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 214-394 |
| Cow position: | chr24:18741577-18741752 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 172, 130 |
| Conread position: | 214-394 |
| Cow position: | chr24:34008578-34008759 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 133 |
| Conread position: | 214-395 |
| Cow position: | chr24:17832820-17832996 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 171, 130 |
| Conread position: | 214-395 |
| Cow position: | chr24:17955449-17955625 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 170, 45 |
| Conread position: | 214-395 |
| Cow position: | chr24:34315351-34315170 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 214-396 |
| Cow position: | chr24:20943163-20942980 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 214-396 |
| Cow position: | chr24:39218845-39219026 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 214-397 |
| Cow position: | chr24:211982-211801 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 134 |
| Conread position: | 214-397 |
| Cow position: | chr24:352611-352789 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 131 |
| Conread position: | 214-397 |
| Cow position: | chr24:8886905-8886728 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 214-397 |
| Cow position: | chr24:10841212-10841397 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 214-397 |
| Cow position: | chr24:15473353-15473176 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 214-397 |
| Cow position: | chr24:19800842-19800662 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 214-397 |
| Cow position: | chr24:22647348-22647526 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 172, 46 |
| Conread position: | 214-397 |
| Cow position: | chr24:27270768-27270595 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 172, 52 |
| Conread position: | 214-397 |
| Cow position: | chr24:28553559-28553731 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 172, 103 |
| Conread position: | 214-397 |
| Cow position: | chr24:30229468-30229288 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 214-397 |
| Cow position: | chr24:42007735-42007559 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 214-400 |
| Cow position: | chr24:18484999-18485183 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 214-400 |
| Cow position: | chr24:28062944-28062765 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 214-400 |
| Cow position: | chr24:29679315-29679494 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 214-400 |
| Cow position: | chr24:35794740-35794923 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 214-400 |
| Cow position: | chr24:43635433-43635251 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 214-401 |
| Cow position: | chr24:31159614-31159432 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 134 |
| Conread position: | 214-402 |
| Cow position: | chr24:27052499-27052684 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 214-406 |
| Cow position: | chr24:26732446-26732259 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 214-408 |
| Cow position: | chr24:28690680-28690489 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 214-410 |
| Cow position: | chr24:34565118-34564926 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 214-412 |
| Cow position: | chr24:5703-5899 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 214-412 |
| Cow position: | chr24:7917366-7917566 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 133 |
| Conread position: | 214-412 |
| Cow position: | chr24:29673517-29673318 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 214-412 |
| Cow position: | chr24:43364356-43364162 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 214-413 |
| Cow position: | chr24:36554838-36555032 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 214-452 |
| Cow position: | chr24:15707447-15707678 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 172, 130 |
| Conread position: | 215-342 |
| Cow position: | chr24:24061813-24061945 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 215-394 |
| Cow position: | chr24:18017221-18017046 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 50, 128 |
| Conread position: | 215-397 |
| Cow position: | chr24:17104576-17104760 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 162 |
| Conread position: | 215-397 |
| Cow position: | chr24:18970515-18970691 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 215-412 |
| Cow position: | chr24:16645326-16645523 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 133 |
| Conread position: | 216-357 |
| Cow position: | chr24:24662138-24662279 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 216-371 |
| Cow position: | chr24:885695-885852 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 216-394 |
| Cow position: | chr24:11840180-11839997 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 216-397 |
| Cow position: | chr24:3493877-3493708 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 170, 98 |
| Conread position: | 216-397 |
| Cow position: | chr24:19769482-19769309 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 216-397 |
| Cow position: | chr24:20024606-20024427 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 170, 53 |
| Conread position: | 216-409 |
| Cow position: | chr24:28721882-28721696 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 216-417 |
| Cow position: | chr24:32070956-32070762 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 96, 43 |
| Conread position: | 217-348 |
| Cow position: | chr24:40184616-40184486 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 217-372 |
| Cow position: | chr24:20249904-20250058 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 217-388 |
| Cow position: | chr24:18331710-18331550 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 217-395 |
| Cow position: | chr24:42103366-42103187 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 217-397 |
| Cow position: | chr24:27719768-27719939 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 168, 19 |
| Conread position: | 217-397 |
| Cow position: | chr24:29782157-29781980 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 217-400 |
| Cow position: | chr24:18695611-18695434 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 219-351 |
| Cow position: | chr24:36008476-36008342 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 219-413 |
| Cow position: | chr24:24136871-24137055 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 220-353 |
| Cow position: | chr24:31382890-31382751 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 220-383 |
| Cow position: | chr24:35576546-35576704 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 123 |
| Conread position: | 220-397 |
| Cow position: | chr24:27906426-27906254 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 106 |
| Conread position: | 221-333 |
| Cow position: | chr24:35150510-35150396 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 221-395 |
| Cow position: | chr24:30226928-30226758 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 165, 119 |
| Conread position: | 221-395 |
| Cow position: | chr24:35074081-35073910 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 221-402 |
| Cow position: | chr24:27267615-27267442 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 164, 39 |
| Conread position: | 222-387 |
| Cow position: | chr24:27874582-27874426 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 222-393 |
| Cow position: | chr24:43432778-43432612 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 165, 122 |
| Conread position: | 222-397 |
| Cow position: | chr24:27149386-27149213 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 127 |
| Conread position: | 222-412 |
| Cow position: | chr24:16625499-16625702 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 224-397 |
| Cow position: | chr24:25678017-25677853 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 228-401 |
| Cow position: | chr24:40984144-40983968 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 143 |
| Conread position: | 229-389 |
| Cow position: | chr24:30544882-30545040 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 230-350 |
| Cow position: | chr24:16509949-16509828 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 230-393 |
| Cow position: | chr24:21860243-21860405 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 117 |
| Conread position: | 230-395 |
| Cow position: | chr24:29707815-29707986 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 233-412 |
| Cow position: | chr24:39905478-39905663 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 27 |
| Conread position: | 241-407 |
| Cow position: | chr24:37945667-37945827 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 19 |
| Conread position: | 244-397 |
| Cow position: | chr24:41423572-41423425 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 142, 100 |
| Conread position: | 249-393 |
| Cow position: | chr24:27810144-27810000 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 254-410 |
| Cow position: | chr24:44041057-44041208 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 260-410 |
| Cow position: | chr24:21264561-21264710 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 84 |
| Conread position: | 262-397 |
| Cow position: | chr24:19465977-19466114 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 274-397 |
| Cow position: | chr24:38347618-38347498 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 70 |
| Conread position: | 276-393 |
| Cow position: | chr24:33238611-33238728 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 112, 43 |
Show alignments to all cow chromosomes.