Cow genome map

Conread name: Ss1.1-Pig4-TMW8036O21.3

Conread position: 1-116
Cow position: chr29:31835481-31835366 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 19

Conread position: 1-127
Cow position: chr29:28087887-28087758 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 12

Conread position: 1-351
Cow position: chr29:41531064-41530726 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 64, 13

Conread position: 2-128
Cow position: chr29:35292298-35292175 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 61, 13

Conread position: 3-126
Cow position: chr29:14746990-14746864 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 3-397
Cow position: chr29:24252479-24252077 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 274
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 111

Conread position: 3-401
Cow position: chr29:32799493-32799877 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 270
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 62, 11

Conread position: 4-348
Cow position: chr29:11397703-11398042 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 53, 18

Conread position: 4-393
Cow position: chr29:22175901-22175528 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 144, 50

Conread position: 7-128
Cow position: chr29:19420412-19420531 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 41

Conread position: 7-395
Cow position: chr29:26017293-26017669 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 256
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 14

Conread position: 8-139
Cow position: chr29:38754731-38754865 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 126

Conread position: 16-126
Cow position: chr29:32655895-32656006 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 17-118
Cow position: chr29:8841251-8841353 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 17-397
Cow position: chr29:40097179-40096799 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 78

Conread position: 20-400
Cow position: chr29:17222611-17222248 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 251
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 49

Conread position: 22-395
Cow position: chr29:12783762-12784118 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 252
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 99

Conread position: 22-397
Cow position: chr29:30441132-30440767 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 42, 62

Conread position: 205-349
Cow position: chr29:11489695-11489841 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 18

Conread position: 211-397
Cow position: chr29:35738252-35738427 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 175, 78

Conread position: 212-393
Cow position: chr29:37599189-37599368 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 81

Conread position: 212-397
Cow position: chr29:6217531-6217707 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 51

Conread position: 213-393
Cow position: chr29:94539-94712 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 166, 34

Conread position: 213-397
Cow position: chr29:7666013-7666192 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 17

Conread position: 214-342
Cow position: chr29:29558416-29558540 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 214-348
Cow position: chr29:6337680-6337543 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 214-349
Cow position: chr29:30227258-30227392 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 214-351
Cow position: chr29:22936289-22936149 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 214-372
Cow position: chr29:29795365-29795523 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 134

Conread position: 214-382
Cow position: chr29:17297153-17296986 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 133

Conread position: 214-388
Cow position: chr29:17301551-17301378 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 130

Conread position: 214-393
Cow position: chr29:11053842-11054018 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 76

Conread position: 214-393
Cow position: chr29:12004745-12004926 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 214-393
Cow position: chr29:28775442-28775618 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 42, 84

Conread position: 214-393
Cow position: chr29:36217132-36216960 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 45

Conread position: 214-394
Cow position: chr29:12025450-12025629 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 132

Conread position: 214-394
Cow position: chr29:39567703-39567529 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 171, 128

Conread position: 214-394
Cow position: chr29:41365128-41364952 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 171, 130

Conread position: 214-395
Cow position: chr29:3538889-3539080 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 214-395
Cow position: chr29:11434136-11433963 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 172, 52

Conread position: 214-395
Cow position: chr29:12680173-12679993 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 47

Conread position: 214-395
Cow position: chr29:14484520-14484705 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 136

Conread position: 214-396
Cow position: chr29:13639350-13639530 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 78

Conread position: 214-397
Cow position: chr29:86994-87179 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 136

Conread position: 214-397
Cow position: chr29:1395614-1395438 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 8

Conread position: 214-397
Cow position: chr29:2984908-2984723 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 45, 134

Conread position: 214-397
Cow position: chr29:4085330-4085158 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 171, 45

Conread position: 214-397
Cow position: chr29:4520357-4520174 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 136

Conread position: 214-397
Cow position: chr29:6286144-6286319 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 214-397
Cow position: chr29:9685990-9686169 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 214-397
Cow position: chr29:10018596-10018413 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 109

Conread position: 214-397
Cow position: chr29:23697994-23697817 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 87, 57

Conread position: 214-397
Cow position: chr29:24952705-24952527 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 115

Conread position: 214-397
Cow position: chr29:25474940-25474750 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 214-397
Cow position: chr29:29769334-29769512 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 131

Conread position: 214-397
Cow position: chr29:29942710-29942894 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 134

Conread position: 214-397
Cow position: chr29:41747465-41747279 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 175

Conread position: 214-399
Cow position: chr29:5409124-5409310 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 61, 74

Conread position: 214-400
Cow position: chr29:4334743-4334563 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 82

Conread position: 214-400
Cow position: chr29:19428676-19428494 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 131

Conread position: 214-401
Cow position: chr29:23243861-23244045 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 133

Conread position: 214-402
Cow position: chr29:2522582-2522408 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 172, 44

Conread position: 214-407
Cow position: chr29:2744250-2744445 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 136

Conread position: 214-409
Cow position: chr29:44378397-44378591 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 132

Conread position: 214-412
Cow position: chr29:11705138-11704944 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 214-412
Cow position: chr29:29057196-29057002 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 98

Conread position: 214-412
Cow position: chr29:36183298-36183095 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 39

Conread position: 214-417
Cow position: chr29:6926026-6925834 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 215-345
Cow position: chr29:40583809-40583678 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 215-349
Cow position: chr29:26206880-26206749 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 215-386
Cow position: chr29:31926273-31926439 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 44, 130

Conread position: 215-397
Cow position: chr29:4367742-4367559 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 115

Conread position: 215-397
Cow position: chr29:9912192-9912011 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 132

Conread position: 215-397
Cow position: chr29:42886407-42886225 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 153

Conread position: 215-412
Cow position: chr29:39643192-39642998 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 90

Conread position: 216-397
Cow position: chr29:1022311-1022132 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 126

Conread position: 216-397
Cow position: chr29:22778160-22778339 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 46, 131

Conread position: 216-397
Cow position: chr29:30188322-30188498 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 131

Conread position: 216-412
Cow position: chr29:32290624-32290424 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 120

Conread position: 217-368
Cow position: chr29:21941615-21941461 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 52, 38

Conread position: 217-397
Cow position: chr29:26654032-26654198 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 168, 42

Conread position: 217-397
Cow position: chr29:40891682-40891859 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 128

Conread position: 217-401
Cow position: chr29:6293464-6293641 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 169, 38

Conread position: 217-407
Cow position: chr29:26735043-26734860 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 71

Conread position: 220-350
Cow position: chr29:2071561-2071693 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 220-353
Cow position: chr29:12625965-12626102 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 220-397
Cow position: chr29:456777-456955 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 39, 59

Conread position: 220-397
Cow position: chr29:868786-868615 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 125

Conread position: 220-397
Cow position: chr29:17409346-17409171 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 33

Conread position: 220-397
Cow position: chr29:35292103-35291929 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 103

Conread position: 224-397
Cow position: chr29:28195508-28195674 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 224-402
Cow position: chr29:16309750-16309579 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 61

Conread position: 227-348
Cow position: chr29:40615517-40615642 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 227-397
Cow position: chr29:16757059-16756897 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 159, 37

Conread position: 230-397
Cow position: chr29:16657695-16657527 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 119

Conread position: 231-417
Cow position: chr29:6844632-6844815 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 148, 29

Conread position: 237-384
Cow position: chr29:31898976-31899121 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 108

Conread position: 256-397
Cow position: chr29:22068772-22068911 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 260-410
Cow position: chr29:9139384-9139236 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 83

Conread position: 264-413
Cow position: chr29:3711356-3711207 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 115, 80

Conread position: 265-397
Cow position: chr29:19338952-19338822 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 120, 95

Conread position: 271-397
Cow position: chr29:5977154-5977279 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 112, 14

Conread position: 277-397
Cow position: chr29:13615684-13615805 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 0

Show alignments to all cow chromosomes.