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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8036O21.3
        

               
Conread position:
               
1-123
               

               
Cow position:
               
chr3:15859192-15859315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr3:15153877-15153753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr3:3656706-3656574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr3:14000368-14000491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr3:18831608-18831485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr3:17235014-17235348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
2-128
               

               
Cow position:
               
chr3:40212846-40212974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr3:30222401-30221955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
3-116
               

               
Cow position:
               
chr3:55318710-55318827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
3-127
               

               
Cow position:
               
chr3:13380087-13380214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr3:11608005-11607881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr3:30180271-30180146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr3:59317889-59317760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr3:68587208-68587082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr3:76056099-76056225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-129
               

               
Cow position:
               
chr3:42933671-42933539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
3-139
               

               
Cow position:
               
chr3:55972894-55973028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 78
               

               
Conread position:
               
3-140
               

               
Cow position:
               
chr3:18059893-18059752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr3:23920238-23920571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr3:14601525-14601896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
4-128
               

               
Cow position:
               
chr3:14211798-14211923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr3:61279124-61278723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
6-397
               

               
Cow position:
               
chr3:2675219-2674846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 88
               

               
Conread position:
               
8-128
               

               
Cow position:
               
chr3:58527561-58527442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
8-128
               

               
Cow position:
               
chr3:59885715-59885598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 73
               

               
Conread position:
               
8-128
               

               
Cow position:
               
chr3:71238333-71238213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
8-128
               

               
Cow position:
               
chr3:78071608-78071731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
8-137
               

               
Cow position:
               
chr3:41826152-41826283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
8-397
               

               
Cow position:
               
chr3:65969358-65968975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr3:54100530-54100863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
10-397
               

               
Cow position:
               
chr3:14625938-14626341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
10-397
               

               
Cow position:
               
chr3:57754294-57754663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
11-116
               

               
Cow position:
               
chr3:75966601-75966709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
11-128
               

               
Cow position:
               
chr3:2392788-2392908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
11-128
               

               
Cow position:
               
chr3:59681727-59681844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
12-397
               

               
Cow position:
               
chr3:55970695-55970325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
15-125
               

               
Cow position:
               
chr3:49787733-49787621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
15-393
               

               
Cow position:
               
chr3:49369786-49369399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
15-400
               

               
Cow position:
               
chr3:2506299-2506663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
16-122
               

               
Cow position:
               
chr3:58101851-58101743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
16-395
               

               
Cow position:
               
chr3:67929994-67930363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
20-135
               

               
Cow position:
               
chr3:34392053-34392169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
20-374
               

               
Cow position:
               
chr3:59035215-59034874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
21-128
               

               
Cow position:
               
chr3:41863793-41863685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
22-397
               

               
Cow position:
               
chr3:63180034-63179675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
22-397
               

               
Cow position:
               
chr3:74500427-74500045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
29-395
               

               
Cow position:
               
chr3:66900564-66900923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
192-397
               

               
Cow position:
               
chr3:24872731-24872534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
200-470
               

               
Cow position:
               
chr3:21693956-21693687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
207-397
               

               
Cow position:
               
chr3:66609839-66610026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
8, 140
               

               
Conread position:
               
207-400
               

               
Cow position:
               
chr3:34937848-34937657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
207-402
               

               
Cow position:
               
chr3:53150327-53150135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
209-397
               

               
Cow position:
               
chr3:2392962-2393145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
209-397
               

               
Cow position:
               
chr3:20677836-20678018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
211-412
               

               
Cow position:
               
chr3:19789116-19789319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
212-397
               

               
Cow position:
               
chr3:12324067-12323881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
213-351
               

               
Cow position:
               
chr3:32457190-32457057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
213-354
               

               
Cow position:
               
chr3:24468385-24468525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
213-395
               

               
Cow position:
               
chr3:18067137-18066954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
213-395
               

               
Cow position:
               
chr3:23876993-23876813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 132
               

               
Conread position:
               
213-400
               

               
Cow position:
               
chr3:65058698-65058516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr3:17952653-17952462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
213-412
               

               
Cow position:
               
chr3:64280935-64281136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
214-337
               

               
Cow position:
               
chr3:34270912-34270786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
214-340
               

               
Cow position:
               
chr3:22510022-22509894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
214-347
               

               
Cow position:
               
chr3:48241613-48241477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
214-348
               

               
Cow position:
               
chr3:24935360-24935230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
214-348
               

               
Cow position:
               
chr3:77271282-77271414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
214-349
               

               
Cow position:
               
chr3:18056434-18056302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
214-349
               

               
Cow position:
               
chr3:18686901-18686766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-349
               

               
Cow position:
               
chr3:32184023-32184162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
214-349
               

               
Cow position:
               
chr3:46541834-46541969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
214-349
               

               
Cow position:
               
chr3:63269218-63269081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
214-349
               

               
Cow position:
               
chr3:77582104-77581968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
214-349
               

               
Cow position:
               
chr3:78896642-78896508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
214-350
               

               
Cow position:
               
chr3:2850899-2851036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
214-350
               

               
Cow position:
               
chr3:43727074-43726935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
214-352
               

               
Cow position:
               
chr3:60389759-60389623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
214-354
               

               
Cow position:
               
chr3:44622891-44623031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-356
               

               
Cow position:
               
chr3:80953643-80953498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
214-362
               

               
Cow position:
               
chr3:73820374-73820525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
214-383
               

               
Cow position:
               
chr3:80053546-80053712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
214-384
               

               
Cow position:
               
chr3:5097202-5097034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
214-384
               

               
Cow position:
               
chr3:53739190-53739355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 132
               

               
Conread position:
               
214-387
               

               
Cow position:
               
chr3:35005771-35005600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr3:5100777-5100946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
172, 44
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr3:39328395-39328215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 136
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr3:44101963-44101784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr3:48252880-48252705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr3:59515099-59514926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr3:75045878-75046054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 144
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr3:78894330-78894504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr3:80581657-80581486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr3:81359112-81359292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 39
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr3:210314-210138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr3:7678654-7678486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
172, 44
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr3:8061124-8060946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr3:23444893-23445075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr3:33698726-33698544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr3:69849512-69849687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr3:70401892-70401721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
172, 46
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr3:83491081-83490902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
214-396
               

               
Cow position:
               
chr3:15051953-15052134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 135
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:3638180-3638003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
171, 47
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:5365672-5365488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:5374327-5374154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:9843582-9843398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:13301855-13302031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:13890472-13890284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:15859671-15859850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:17957462-17957279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:19708109-19708288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:21014963-21015148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:27544340-27544518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
130, 5
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:27696983-27697162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:28908208-28908382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:31309359-31309538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:49218319-49218498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:49460931-49461116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:52863189-52863369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 131
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:53113170-53112990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:55106444-55106622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
172, 63
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:55712435-55712246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
43, 140
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:57577692-57577515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:57624459-57624278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:59474117-59473927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:60597539-60597360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:61539801-61539617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:67929265-67929447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:70334700-70334888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:71238149-71237973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
172, 47
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:72391077-72390901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:73395111-73394937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:74878594-74878773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
46, 131
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:75158356-75158176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:75570457-75570631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:79207991-79208182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 111
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:83201530-83201713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
214-398
               

               
Cow position:
               
chr3:11711960-11711772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 135
               

               
Conread position:
               
214-398
               

               
Cow position:
               
chr3:15232026-15231837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr3:12711920-12712105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 134
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr3:26739419-26739604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 132
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr3:42178152-42177974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr3:43233501-43233321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr3:59884074-59884258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 134
               

               
Conread position:
               
214-402
               

               
Cow position:
               
chr3:1517517-1517708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
214-402
               

               
Cow position:
               
chr3:26982053-26981876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
172, 35
               

               
Conread position:
               
214-402
               

               
Cow position:
               
chr3:73709042-73708860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 102
               

               
Conread position:
               
214-402
               

               
Cow position:
               
chr3:84000608-84000424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr3:73764200-73764384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
214-404
               

               
Cow position:
               
chr3:71238470-71238276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
214-407
               

               
Cow position:
               
chr3:18763885-18763699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
214-407
               

               
Cow position:
               
chr3:65413283-65413472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
214-409
               

               
Cow position:
               
chr3:72676086-72675897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
172, 130
               

               
Conread position:
               
214-411
               

               
Cow position:
               
chr3:74502330-74502519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
172, 45
               

               
Conread position:
               
214-412
               

               
Cow position:
               
chr3:8393345-8393146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
214-412
               

               
Cow position:
               
chr3:56476677-56476482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
214-412
               

               
Cow position:
               
chr3:57553853-57554048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
214-412
               

               
Cow position:
               
chr3:61171513-61171710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
165, 61
               

               
Conread position:
               
214-412
               

               
Cow position:
               
chr3:82461174-82460981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
214-415
               

               
Cow position:
               
chr3:29360151-29360338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
214-417
               

               
Cow position:
               
chr3:55819753-55819545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 139
               

               
Conread position:
               
214-418
               

               
Cow position:
               
chr3:66375315-66375112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr3:57760493-57760263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
162, 130
               

               
Conread position:
               
215-349
               

               
Cow position:
               
chr3:80468682-80468816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
215-385
               

               
Cow position:
               
chr3:76713326-76713495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
215-387
               

               
Cow position:
               
chr3:11987323-11987155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 131
               

               
Conread position:
               
215-395
               

               
Cow position:
               
chr3:81471102-81471282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
215-397
               

               
Cow position:
               
chr3:49650382-49650201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
215-397
               

               
Cow position:
               
chr3:75687443-75687622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
215-397
               

               
Cow position:
               
chr3:77365296-77365481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
215-408
               

               
Cow position:
               
chr3:26920902-26920713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
215-410
               

               
Cow position:
               
chr3:75727590-75727783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
216-340
               

               
Cow position:
               
chr3:56384-56509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
216-387
               

               
Cow position:
               
chr3:53192433-53192594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
216-395
               

               
Cow position:
               
chr3:25060073-25059896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 131
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr3:6689993-6689815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr3:14632990-14633167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 114
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr3:15751720-15751905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr3:20802627-20802813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr3:22820565-22820379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 158
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr3:53384287-53384467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
216-400
               

               
Cow position:
               
chr3:53270823-53270642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
216-402
               

               
Cow position:
               
chr3:44534766-44534955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr3:17895837-17895645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
217-350
               

               
Cow position:
               
chr3:1534624-1534762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
217-391
               

               
Cow position:
               
chr3:83707981-83708151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
217-393
               

               
Cow position:
               
chr3:3985319-3985145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
217-397
               

               
Cow position:
               
chr3:3164503-3164679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
217-397
               

               
Cow position:
               
chr3:38035598-38035781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
217-397
               

               
Cow position:
               
chr3:61024309-61024487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
217-397
               

               
Cow position:
               
chr3:63860897-63861080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
217-400
               

               
Cow position:
               
chr3:21050845-21051026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 129
               

               
Conread position:
               
217-408
               

               
Cow position:
               
chr3:76267983-76268180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 166
               

               
Conread position:
               
217-412
               

               
Cow position:
               
chr3:59000760-59000946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
217-412
               

               
Cow position:
               
chr3:67520177-67520376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 151
               

               
Conread position:
               
219-348
               

               
Cow position:
               
chr3:6900619-6900492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
219-400
               

               
Cow position:
               
chr3:73590004-73590185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 131
               

               
Conread position:
               
220-349
               

               
Cow position:
               
chr3:27108917-27109042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
220-355
               

               
Cow position:
               
chr3:76169295-76169432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
220-393
               

               
Cow position:
               
chr3:15228834-15229004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
166, 39
               

               
Conread position:
               
220-395
               

               
Cow position:
               
chr3:71231385-71231217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
220-395
               

               
Cow position:
               
chr3:82056123-82056299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
220-397
               

               
Cow position:
               
chr3:14598936-14598767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
166, 12
               

               
Conread position:
               
220-397
               

               
Cow position:
               
chr3:73759527-73759699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
220-399
               

               
Cow position:
               
chr3:53046670-53046844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
220-399
               

               
Cow position:
               
chr3:57764211-57764042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
166, 39
               

               
Conread position:
               
220-400
               

               
Cow position:
               
chr3:44932505-44932326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
220-400
               

               
Cow position:
               
chr3:54946120-54945942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
220-413
               

               
Cow position:
               
chr3:71430215-71430413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
221-342
               

               
Cow position:
               
chr3:30701298-30701172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
221-387
               

               
Cow position:
               
chr3:23037634-23037802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
221-391
               

               
Cow position:
               
chr3:49731651-49731819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
221-393
               

               
Cow position:
               
chr3:79292817-79292649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
221-397
               

               
Cow position:
               
chr3:51578335-51578502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
221-397
               

               
Cow position:
               
chr3:55085183-55085367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
221-400
               

               
Cow position:
               
chr3:70565750-70565924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
222-392
               

               
Cow position:
               
chr3:45313037-45312871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
222-393
               

               
Cow position:
               
chr3:3062555-3062377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
224-397
               

               
Cow position:
               
chr3:46350659-46350480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
224-397
               

               
Cow position:
               
chr3:47284821-47284654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
224-400
               

               
Cow position:
               
chr3:29813230-29813061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
227-355
               

               
Cow position:
               
chr3:38691426-38691554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
227-395
               

               
Cow position:
               
chr3:4087177-4087347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
227-395
               

               
Cow position:
               
chr3:46901176-46901015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
159, 33
               

               
Conread position:
               
227-397
               

               
Cow position:
               
chr3:27212346-27212179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
227-397
               

               
Cow position:
               
chr3:55062889-55063051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
227-397
               

               
Cow position:
               
chr3:61144081-61143914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
227-397
               

               
Cow position:
               
chr3:66883958-66884124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
227-399
               

               
Cow position:
               
chr3:67161926-67161755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
227-410
               

               
Cow position:
               
chr3:39171498-39171678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
228-397
               

               
Cow position:
               
chr3:25691732-25691570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
230-395
               

               
Cow position:
               
chr3:34669748-34669909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
236-395
               

               
Cow position:
               
chr3:15661728-15661881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
256-397
               

               
Cow position:
               
chr3:42588309-42588170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
256-399
               

               
Cow position:
               
chr3:59597135-59596996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
259-410
               

               
Cow position:
               
chr3:10896779-10896634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 77
               

               
Conread position:
               
261-400
               

               
Cow position:
               
chr3:26970774-26970641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
265-397
               

               
Cow position:
               
chr3:83921140-83921019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
266-397
               

               
Cow position:
               
chr3:22872105-22872235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
280-397
               

               
Cow position:
               
chr3:48530573-48530454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 22
               
Show alignments to all cow chromosomes.