Cow genome map

Conread name: Ss1.1-Pig4-TMW8036O21.3

Conread position: 1-91
Cow position: chrX:8759867-8759776 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 1-108
Cow position: chrX:15545408-15545515 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 19

Conread position: 1-113
Cow position: chrX:24170481-24170590 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 93

Conread position: 1-128
Cow position: chrX:20339652-20339783 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 13

Conread position: 1-135
Cow position: chrX:17498566-17498425 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 13

Conread position: 1-350
Cow position: chrX:20168799-20168466 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 50

Conread position: 1-351
Cow position: chrX:16348309-16348661 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 17, 99

Conread position: 1-393
Cow position: chrX:5872575-5872188 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 13

Conread position: 2-116
Cow position: chrX:11529581-11529466 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 2-356
Cow position: chrX:25282771-25283112 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 98

Conread position: 2-397
Cow position: chrX:46588063-46587686 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 73

Conread position: 2-412
Cow position: chrX:23513764-23514165 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 287
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 25

Conread position: 3-124
Cow position: chrX:12290959-12290834 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 12

Conread position: 3-126
Cow position: chrX:30962633-30962764 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 3-126
Cow position: chrX:35885491-35885614 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 17

Conread position: 3-128
Cow position: chrX:11670929-11670797 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 3-128
Cow position: chrX:15100219-15100094 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 106, 12

Conread position: 3-128
Cow position: chrX:19717754-19717631 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 46

Conread position: 3-128
Cow position: chrX:35285417-35285284 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 3-128
Cow position: chrX:35509438-35509568 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 3-128
Cow position: chrX:41199464-41199338 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 3-128
Cow position: chrX:46910049-46909926 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 11

Conread position: 3-129
Cow position: chrX:41194149-41194015 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 126

Conread position: 3-135
Cow position: chrX:27145841-27145707 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 3-135
Cow position: chrX:41215565-41215425 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 3-397
Cow position: chrX:7351541-7351166 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 262
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 62, 17

Conread position: 3-397
Cow position: chrX:42246939-42247317 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 276
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 61, 85

Conread position: 3-397
Cow position: chrX:44961995-44961618 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 17

Conread position: 3-407
Cow position: chrX:27442297-27442701 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 261
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 17

Conread position: 4-397
Cow position: chrX:11084800-11085190 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 60, 16

Conread position: 5-395
Cow position: chrX:32821281-32820897 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 274
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 14, 105

Conread position: 6-128
Cow position: chrX:35269094-35268972 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 9

Conread position: 6-128
Cow position: chrX:42461388-42461511 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 6-139
Cow position: chrX:38726903-38727039 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 67

Conread position: 6-397
Cow position: chrX:34503165-34502789 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 262
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 28

Conread position: 8-118
Cow position: chrX:19690638-19690530 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 11

Conread position: 8-128
Cow position: chrX:1996214-1996341 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 8-397
Cow position: chrX:29680009-29680393 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 263
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 102

Conread position: 8-402
Cow position: chrX:37489966-37489588 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 265
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 114

Conread position: 9-128
Cow position: chrX:19356700-19356574 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 10-128
Cow position: chrX:3494815-3494936 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 10-396
Cow position: chrX:40480614-40481001 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 10

Conread position: 11-109
Cow position: chrX:23497463-23497562 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 12-400
Cow position: chrX:13382575-13382193 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 87

Conread position: 13-400
Cow position: chrX:37232674-37232277 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 263
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 260

Conread position: 14-116
Cow position: chrX:27668731-27668835 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 14-397
Cow position: chrX:16762999-16762633 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 84

Conread position: 15-393
Cow position: chrX:27393788-27394149 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 256
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 33

Conread position: 16-118
Cow position: chrX:28846664-28846766 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 12

Conread position: 16-135
Cow position: chrX:4399347-4399222 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 102

Conread position: 16-397
Cow position: chrX:38549676-38549319 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 259
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 65

Conread position: 20-124
Cow position: chrX:13924086-13923979 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 21-338
Cow position: chrX:39220312-39220000 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 96

Conread position: 21-397
Cow position: chrX:40567829-40567470 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 43, 87

Conread position: 25-395
Cow position: chrX:18694702-18695051 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 247
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 26

Conread position: 28-395
Cow position: chrX:13868921-13868562 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 245
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 60

Conread position: 29-397
Cow position: chrX:10831265-10831626 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 35, 80

Conread position: 37-393
Cow position: chrX:28877958-28878299 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 69

Conread position: 154-348
Cow position: chrX:42235420-42235618 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 47

Conread position: 197-397
Cow position: chrX:16416570-16416377 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 16

Conread position: 202-397
Cow position: chrX:15139489-15139678 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 184, 142

Conread position: 207-350
Cow position: chrX:42789673-42789529 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 207-397
Cow position: chrX:48236868-48236683 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 175, 15

Conread position: 210-397
Cow position: chrX:41199158-41198969 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 98

Conread position: 213-393
Cow position: chrX:14973695-14973869 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 5

Conread position: 213-397
Cow position: chrX:43049390-43049215 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 171, 47

Conread position: 213-412
Cow position: chrX:151952-151750 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 77

Conread position: 214-346
Cow position: chrX:20881893-20882025 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 45, 90

Conread position: 214-349
Cow position: chrX:161458-161322 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 74

Conread position: 214-349
Cow position: chrX:1572093-1572228 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 57

Conread position: 214-349
Cow position: chrX:5017365-5017505 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 214-349
Cow position: chrX:19003343-19003209 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 214-349
Cow position: chrX:29194278-29194143 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 98

Conread position: 214-349
Cow position: chrX:41068771-41068630 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 214-349
Cow position: chrX:43567965-43567831 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 214-349
Cow position: chrX:43730178-43730309 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 10

Conread position: 214-350
Cow position: chrX:28845879-28845739 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 214-351
Cow position: chrX:45598557-45598694 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 214-354
Cow position: chrX:42855504-42855359 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 95

Conread position: 214-363
Cow position: chrX:29549499-29549652 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 214-369
Cow position: chrX:6265552-6265710 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 214-376
Cow position: chrX:4296779-4296939 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 40

Conread position: 214-381
Cow position: chrX:23562678-23562512 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 59

Conread position: 214-387
Cow position: chrX:5679523-5679688 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 74

Conread position: 214-388
Cow position: chrX:46072771-46072949 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 160

Conread position: 214-393
Cow position: chrX:1514366-1514536 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 171, 89

Conread position: 214-393
Cow position: chrX:29121093-29120917 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 131

Conread position: 214-393
Cow position: chrX:38728780-38728608 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 172, 32

Conread position: 214-394
Cow position: chrX:6488625-6488446 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 45

Conread position: 214-394
Cow position: chrX:45934018-45933828 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 17

Conread position: 214-394
Cow position: chrX:47481846-47481669 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 170, 130

Conread position: 214-395
Cow position: chrX:917322-917503 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 22

Conread position: 214-395
Cow position: chrX:1499711-1499534 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 91

Conread position: 214-395
Cow position: chrX:11856476-11856297 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 96

Conread position: 214-395
Cow position: chrX:20697563-20697738 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 165, 84

Conread position: 214-395
Cow position: chrX:27228172-27227992 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 172, 130

Conread position: 214-395
Cow position: chrX:39558302-39558478 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 134

Conread position: 214-395
Cow position: chrX:41878884-41879063 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 107

Conread position: 214-395
Cow position: chrX:42492477-42492646 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 172, 45

Conread position: 214-395
Cow position: chrX:42994659-42994485 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 111

Conread position: 214-396
Cow position: chrX:30133272-30133459 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 66

Conread position: 214-397
Cow position: chrX:3579990-3579811 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 87

Conread position: 214-397
Cow position: chrX:4269019-4269200 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 172, 61

Conread position: 214-397
Cow position: chrX:8797302-8797118 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 133

Conread position: 214-397
Cow position: chrX:8900073-8899895 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 72

Conread position: 214-397
Cow position: chrX:11589542-11589721 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 131

Conread position: 214-397
Cow position: chrX:11614744-11614566 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 172, 130

Conread position: 214-397
Cow position: chrX:11633728-11633545 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 132

Conread position: 214-397
Cow position: chrX:12018338-12018143 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 64

Conread position: 214-397
Cow position: chrX:15007103-15007283 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 132

Conread position: 214-397
Cow position: chrX:17662549-17662732 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 48

Conread position: 214-397
Cow position: chrX:17726021-17725841 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 118

Conread position: 214-397
Cow position: chrX:21593333-21593154 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 131

Conread position: 214-397
Cow position: chrX:23563745-23563926 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 131

Conread position: 214-397
Cow position: chrX:25035336-25035517 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 172, 61

Conread position: 214-397
Cow position: chrX:26440737-26440911 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 214-397
Cow position: chrX:26625625-26625806 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 107

Conread position: 214-397
Cow position: chrX:27685294-27685114 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 130

Conread position: 214-397
Cow position: chrX:27705632-27705451 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 70

Conread position: 214-397
Cow position: chrX:29601782-29601962 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 134

Conread position: 214-397
Cow position: chrX:35681388-35681205 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 133

Conread position: 214-397
Cow position: chrX:36356158-36355982 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 60

Conread position: 214-397
Cow position: chrX:36961687-36961506 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 172, 130

Conread position: 214-397
Cow position: chrX:41166916-41167098 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 134

Conread position: 214-397
Cow position: chrX:42507602-42507780 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 47

Conread position: 214-397
Cow position: chrX:42875029-42874848 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 50, 131

Conread position: 214-397
Cow position: chrX:44054848-44054668 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 164, 51

Conread position: 214-397
Cow position: chrX:44397061-44396886 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 10

Conread position: 214-399
Cow position: chrX:5638123-5638299 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 54

Conread position: 214-400
Cow position: chrX:6278452-6278638 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 134

Conread position: 214-400
Cow position: chrX:9252117-9252311 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 36

Conread position: 214-400
Cow position: chrX:9365630-9365810 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 70

Conread position: 214-400
Cow position: chrX:13785314-13785499 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 131

Conread position: 214-400
Cow position: chrX:38094470-38094659 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 137

Conread position: 214-402
Cow position: chrX:11454996-11455196 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 214-406
Cow position: chrX:42873433-42873249 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 172, 41

Conread position: 214-408
Cow position: chrX:7710493-7710687 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 131

Conread position: 214-411
Cow position: chrX:20339846-20340041 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 26

Conread position: 214-412
Cow position: chrX:4043818-4044001 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 165, 20

Conread position: 214-412
Cow position: chrX:5900512-5900307 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 51

Conread position: 214-412
Cow position: chrX:6690214-6690398 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 214-412
Cow position: chrX:7571951-7571756 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 134

Conread position: 214-412
Cow position: chrX:7718895-7718704 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 214-412
Cow position: chrX:11656127-11655938 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 148, 36

Conread position: 214-412
Cow position: chrX:15147147-15147338 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 171, 47

Conread position: 214-412
Cow position: chrX:43779801-43780003 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 63, 153

Conread position: 214-412
Cow position: chrX:46433537-46433336 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 130

Conread position: 214-413
Cow position: chrX:7646297-7646109 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 172, 81

Conread position: 215-390
Cow position: chrX:27946009-27946184 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 44

Conread position: 215-393
Cow position: chrX:17498130-17497957 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 74

Conread position: 215-395
Cow position: chrX:24365776-24365958 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 135

Conread position: 215-395
Cow position: chrX:38964153-38963975 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 135

Conread position: 215-396
Cow position: chrX:34792266-34792439 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 44

Conread position: 215-397
Cow position: chrX:12309341-12309518 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 44

Conread position: 215-397
Cow position: chrX:12405336-12405520 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 85

Conread position: 215-397
Cow position: chrX:19188976-19188807 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 215-400
Cow position: chrX:9855343-9855168 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 82

Conread position: 215-400
Cow position: chrX:9954184-9954009 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 82

Conread position: 215-400
Cow position: chrX:21672599-21672419 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 171, 129

Conread position: 215-400
Cow position: chrX:34402045-34401862 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 37

Conread position: 215-400
Cow position: chrX:47046464-47046651 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 141, 44

Conread position: 216-351
Cow position: chrX:45875436-45875300 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 216-393
Cow position: chrX:45113663-45113489 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 124

Conread position: 216-397
Cow position: chrX:9997289-9997468 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 129

Conread position: 216-397
Cow position: chrX:41992002-41992178 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 48, 62

Conread position: 216-400
Cow position: chrX:5118458-5118638 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 82

Conread position: 216-400
Cow position: chrX:41027203-41027021 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 133

Conread position: 216-412
Cow position: chrX:41238310-41238516 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 95

Conread position: 216-412
Cow position: chrX:42461700-42461896 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 155

Conread position: 217-349
Cow position: chrX:28134383-28134254 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 13

Conread position: 217-355
Cow position: chrX:48044471-48044610 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 217-395
Cow position: chrX:23785690-23785526 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 42

Conread position: 217-395
Cow position: chrX:29509395-29509575 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 130

Conread position: 217-397
Cow position: chrX:4091683-4091514 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 217-397
Cow position: chrX:14925043-14924866 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 20

Conread position: 217-397
Cow position: chrX:31986819-31987002 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 27

Conread position: 217-397
Cow position: chrX:40648029-40647844 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 217-404
Cow position: chrX:42760028-42759843 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 13

Conread position: 217-412
Cow position: chrX:36723046-36723242 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 124

Conread position: 217-413
Cow position: chrX:47054478-47054682 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 153

Conread position: 218-393
Cow position: chrX:47379425-47379607 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 220-395
Cow position: chrX:6234410-6234584 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 128

Conread position: 220-397
Cow position: chrX:8925739-8925562 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 142, 155

Conread position: 220-397
Cow position: chrX:22387206-22387376 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 166, 40

Conread position: 220-400
Cow position: chrX:1616001-1616180 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 127

Conread position: 220-400
Cow position: chrX:12116087-12115903 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 220-409
Cow position: chrX:6414087-6413900 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 138

Conread position: 220-412
Cow position: chrX:30543244-30543441 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 129

Conread position: 221-397
Cow position: chrX:10411947-10412118 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 35, 100

Conread position: 221-397
Cow position: chrX:29723779-29723608 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 40

Conread position: 221-397
Cow position: chrX:45993265-45993090 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 126

Conread position: 222-397
Cow position: chrX:41743952-41743779 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 126

Conread position: 222-409
Cow position: chrX:48385324-48385504 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 164, 38

Conread position: 222-412
Cow position: chrX:27680436-27680251 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 96

Conread position: 222-412
Cow position: chrX:43527546-43527353 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 30

Conread position: 224-397
Cow position: chrX:14003610-14003774 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 161, 35

Conread position: 224-407
Cow position: chrX:35969050-35969228 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 35

Conread position: 227-393
Cow position: chrX:35413651-35413493 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 25

Conread position: 227-400
Cow position: chrX:38439514-38439342 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 122

Conread position: 227-412
Cow position: chrX:30832819-30832996 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 152, 32

Conread position: 227-413
Cow position: chrX:17908255-17908435 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 71

Conread position: 228-400
Cow position: chrX:31252449-31252282 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 117

Conread position: 232-413
Cow position: chrX:20752282-20752108 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 113

Conread position: 233-397
Cow position: chrX:34441422-34441585 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 113

Conread position: 235-417
Cow position: chrX:23497642-23497822 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 112

Conread position: 254-414
Cow position: chrX:35284625-35284470 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 89

Conread position: 270-397
Cow position: chrX:36283340-36283216 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 72

Conread position: 272-406
Cow position: chrX:47079387-47079255 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 306-397
Cow position: chrX:6640082-6639992 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 38

Show alignments to all cow chromosomes.