Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037C12.3 | 
| Conread position: | 11-169 | 
| Cow position: | chr4:51014382-51014228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 28, 69 | 
| Conread position: | 11-203 | 
| Cow position: | chr4:68880834-68880635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 6, 170 | 
| Conread position: | 13-197 | 
| Cow position: | chr4:5610704-5610887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 15-197 | 
| Cow position: | chr4:46529948-46530129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 117, 83 | 
| Conread position: | 16-171 | 
| Cow position: | chr4:2263406-2263557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 23, 71 | 
| Conread position: | 16-197 | 
| Cow position: | chr4:12033641-12033467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 16-197 | 
| Cow position: | chr4:19264968-19264792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 16-197 | 
| Cow position: | chr4:32249795-32249618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 16-202 | 
| Cow position: | chr4:20630717-20630534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 16-203 | 
| Cow position: | chr4:19744283-19744090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 89, 66 | 
| Conread position: | 16-203 | 
| Cow position: | chr4:60838491-60838296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 18-193 | 
| Cow position: | chr4:43898587-43898756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 18-194 | 
| Cow position: | chr4:30573261-30573085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 21, 82 | 
| Conread position: | 18-197 | 
| Cow position: | chr4:12605579-12605756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 18-197 | 
| Cow position: | chr4:16363503-16363324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 21, 88 | 
| Conread position: | 18-197 | 
| Cow position: | chr4:26874605-26874784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 60, 81 | 
| Conread position: | 18-197 | 
| Cow position: | chr4:51122338-51122161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 46, 89 | 
| Conread position: | 18-202 | 
| Cow position: | chr4:2226462-2226645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 18-202 | 
| Cow position: | chr4:3800986-3801170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 21, 82 | 
| Conread position: | 18-202 | 
| Cow position: | chr4:10884940-10884757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 18-202 | 
| Cow position: | chr4:19957330-19957146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 21, 82 | 
| Conread position: | 18-202 | 
| Cow position: | chr4:66020696-66020513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 21-202 | 
| Cow position: | chr4:1436376-1436540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 21-202 | 
| Cow position: | chr4:33171455-33171275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 21-202 | 
| Cow position: | chr4:53544760-53544584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 21-202 | 
| Cow position: | chr4:58485172-58485346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 21-209 | 
| Cow position: | chr4:18099648-18099835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 21-213 | 
| Cow position: | chr4:4379672-4379481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 22-169 | 
| Cow position: | chr4:4673135-4673286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 22-170 | 
| Cow position: | chr4:48798373-48798513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 22-172 | 
| Cow position: | chr4:48411612-48411760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 22-177 | 
| Cow position: | chr4:9519521-9519367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 22-192 | 
| Cow position: | chr4:36891976-36891809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 22-194 | 
| Cow position: | chr4:61449814-61449640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 92, 76 | 
| Conread position: | 22-200 | 
| Cow position: | chr4:54190062-54189884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 133, 76 | 
| Conread position: | 22-202 | 
| Cow position: | chr4:10403417-10403596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 22-202 | 
| Cow position: | chr4:34384117-34384295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 152, 83 | 
| Conread position: | 22-202 | 
| Cow position: | chr4:39421893-39421714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 22-202 | 
| Cow position: | chr4:47752616-47752443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 22-202 | 
| Cow position: | chr4:62569988-62569803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 22-203 | 
| Cow position: | chr4:38181047-38180872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 47, 77 | 
| Conread position: | 22-205 | 
| Cow position: | chr4:33496857-33496675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 22-213 | 
| Cow position: | chr4:25972233-25972040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 91, 76 | 
| Conread position: | 23-197 | 
| Cow position: | chr4:11025922-11026099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 23-202 | 
| Cow position: | chr4:37786596-37786420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 23-202 | 
| Cow position: | chr4:44777895-44778073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 23-202 | 
| Cow position: | chr4:60224582-60224756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 24-132 | 
| Cow position: | chr4:22101916-22102023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 24-133 | 
| Cow position: | chr4:46743951-46744059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-136 | 
| Cow position: | chr4:5231505-5231616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-136 | 
| Cow position: | chr4:31775023-31775134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-136 | 
| Cow position: | chr4:44051564-44051453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-138 | 
| Cow position: | chr4:52980091-52979978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 110, 62 | 
| Conread position: | 24-145 | 
| Cow position: | chr4:19026076-19026196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-153 | 
| Cow position: | chr4:12588889-12588761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-154 | 
| Cow position: | chr4:55657246-55657375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-158 | 
| Cow position: | chr4:30295246-30295113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-158 | 
| Cow position: | chr4:59838596-59838463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-159 | 
| Cow position: | chr4:17751646-17751780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-159 | 
| Cow position: | chr4:25045697-25045563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-161 | 
| Cow position: | chr4:12237953-12238088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-163 | 
| Cow position: | chr4:10553523-10553387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-163 | 
| Cow position: | chr4:60651878-60651739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 106, 74 | 
| Conread position: | 24-168 | 
| Cow position: | chr4:30307289-30307432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-168 | 
| Cow position: | chr4:59783968-59783817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 24-175 | 
| Cow position: | chr4:18738448-18738598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-179 | 
| Cow position: | chr4:23273423-23273268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 24-184 | 
| Cow position: | chr4:9375793-9375952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 24-184 | 
| Cow position: | chr4:20656768-20656928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 24-184 | 
| Cow position: | chr4:23150364-23150522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 24-192 | 
| Cow position: | chr4:21844428-21844258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 54, 77 | 
| Conread position: | 24-193 | 
| Cow position: | chr4:6034731-6034899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-193 | 
| Cow position: | chr4:43884389-43884221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:489146-489315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:1927339-1927508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:3129151-3128982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:6231654-6231485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:9357534-9357365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:17067817-17067986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:18973788-18973621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:19585960-19586129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:29833918-29833750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:38584173-38584007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:38707783-38707948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:41097263-41097098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:54501986-54502165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 89, 58 | 
| Conread position: | 24-194 | 
| Cow position: | chr4:64874733-64874900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:652323-652151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:2140356-2140182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 94, 68 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:3252256-3252428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 95, 60 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:5882771-5882599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:8678097-8677925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:13979335-13979166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:17235315-17235145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:21342369-21342197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:24179182-24179354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:34713112-34712941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:36025975-36026147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:47020599-47020424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:54147137-54147305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 161, 85 | 
| Conread position: | 24-197 | 
| Cow position: | chr4:65198505-65198677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-198 | 
| Cow position: | chr4:44733912-44733742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 24-200 | 
| Cow position: | chr4:8415140-8415317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 160, 74 | 
| Conread position: | 24-201 | 
| Cow position: | chr4:54494179-54494005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 149, 74 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:120394-120571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:162376-162199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:359178-359001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:533586-533409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:1007188-1007011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:1027930-1028105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 157, 68 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:1499800-1499972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:2191002-2191175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:3170576-3170399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:3450094-3449921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:3474966-3474790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:3961600-3961777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:4850637-4850460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:4923976-4924153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:5441365-5441542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:6547393-6547570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:7139070-7139247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:7779695-7779519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:8377844-8378021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:9041242-9041065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:10044473-10044648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:13500686-13500863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:14684507-14684330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:15056099-15055922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:15617990-15617813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:15802543-15802720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:16642111-16641937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:16859425-16859600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:17033205-17033382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:17821826-17821649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:17877254-17877076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 135, 74 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:18005010-18004833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:18331382-18331205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:18845086-18844917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:19049557-19049380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:19237365-19237186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 90, 75 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:20616422-20616599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:21044865-21045042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:23508492-23508318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 123, 74 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:24140171-24139992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 149, 73 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:27337507-27337334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:27655383-27655206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:28855406-28855229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:29034900-29034724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 29, 75 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:29530163-29530338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:29560233-29560410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:30474676-30474498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 45, 76 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:31561938-31562112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 131, 31 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:31868580-31868403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:33020336-33020513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:35144249-35144426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:36899672-36899496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:43316353-43316530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:44593107-44593283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 89, 66 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:45114095-45114272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:45235501-45235678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:46585611-46585788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:46711308-46711485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:46744122-46744295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:47116132-47115955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:47264073-47263896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:47949043-47949220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:48030154-48029977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:48732972-48732795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:49744967-49744790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:54161767-54161944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:54757963-54758136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:55670536-55670363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 152, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:57988039-57987862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:58292026-58291858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:60579834-60580011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:60856056-60855879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:61242574-61242398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:61651258-61651437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 98, 51 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:61817108-61817285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:62453692-62453869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:62906726-62906903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:62962067-62962241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:63195284-63195461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:64156024-64155847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-202 | 
| Cow position: | chr4:67767715-67767538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-203 | 
| Cow position: | chr4:606901-606723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-203 | 
| Cow position: | chr4:62120303-62120124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 24-205 | 
| Cow position: | chr4:14164082-14163902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-205 | 
| Cow position: | chr4:25596190-25596369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-205 | 
| Cow position: | chr4:54695736-54695916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 24-210 | 
| Cow position: | chr4:33146153-33145967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 180, 75 | 
| Conread position: | 24-212 | 
| Cow position: | chr4:47269463-47269274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 162, 75 | 
| Conread position: | 24-213 | 
| Cow position: | chr4:27178120-27177934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 131, 34 | 
| Conread position: | 24-213 | 
| Cow position: | chr4:43896201-43896389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 24-214 | 
| Cow position: | chr4:28613174-28612992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 24-219 | 
| Cow position: | chr4:38834818-38835011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 25-193 | 
| Cow position: | chr4:26468522-26468355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 25-202 | 
| Cow position: | chr4:6446055-6445880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 25-202 | 
| Cow position: | chr4:12751670-12751483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 116, 73 | 
| Conread position: | 25-202 | 
| Cow position: | chr4:20243451-20243275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 25-202 | 
| Cow position: | chr4:43476496-43476672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 26-158 | 
| Cow position: | chr4:47114402-47114533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 27-202 | 
| Cow position: | chr4:5874362-5874198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 30-165 | 
| Cow position: | chr4:15462968-15463104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 30-202 | 
| Cow position: | chr4:3284068-3284239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 32-202 | 
| Cow position: | chr4:22237137-22237298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 34-151 | 
| Cow position: | chr4:63430757-63430641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 34-194 | 
| Cow position: | chr4:50193823-50193658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 89, 25 | 
| Conread position: | 34-197 | 
| Cow position: | chr4:21297499-21297656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 34-197 | 
| Cow position: | chr4:33069554-33069716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 34-197 | 
| Cow position: | chr4:35261101-35261263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 34-202 | 
| Cow position: | chr4:6265930-6266097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 34-202 | 
| Cow position: | chr4:10122692-10122525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 34-202 | 
| Cow position: | chr4:11918665-11918833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 81, 54 | 
| Conread position: | 34-202 | 
| Cow position: | chr4:18812924-18813091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 34-202 | 
| Cow position: | chr4:26131444-26131277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 34-202 | 
| Cow position: | chr4:38564408-38564575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 34-202 | 
| Cow position: | chr4:40218124-40217957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 34-202 | 
| Cow position: | chr4:41962182-41962015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 34-202 | 
| Cow position: | chr4:53316751-53316918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 35-142 | 
| Cow position: | chr4:8769320-8769210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 35-185 | 
| Cow position: | chr4:27997052-27996905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 35-202 | 
| Cow position: | chr4:8700423-8700258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 35-202 | 
| Cow position: | chr4:23451741-23451901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 35-202 | 
| Cow position: | chr4:27287822-27287988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 36-194 | 
| Cow position: | chr4:18335667-18335824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 36-197 | 
| Cow position: | chr4:3893054-3892892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 36-197 | 
| Cow position: | chr4:25352303-25352459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 36-197 | 
| Cow position: | chr4:65464755-65464912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 36-198 | 
| Cow position: | chr4:27539949-27539785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 68, 44 | 
| Conread position: | 36-202 | 
| Cow position: | chr4:22850395-22850556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 30, 65 | 
| Conread position: | 38-142 | 
| Cow position: | chr4:13327845-13327949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 38-168 | 
| Cow position: | chr4:24002639-24002763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 38-170 | 
| Cow position: | chr4:2601482-2601355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 38-172 | 
| Cow position: | chr4:1365913-1366046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 38-175 | 
| Cow position: | chr4:28173589-28173725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 38-192 | 
| Cow position: | chr4:4086086-4086241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 78, 59 | 
| Conread position: | 38-192 | 
| Cow position: | chr4:23647498-23647646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 38-192 | 
| Cow position: | chr4:33613331-33613477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 38-192 | 
| Cow position: | chr4:42480515-42480364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 38-193 | 
| Cow position: | chr4:14229221-14229377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 38-193 | 
| Cow position: | chr4:48496960-48496805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 38-194 | 
| Cow position: | chr4:6167685-6167846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 31, 65 | 
| Conread position: | 38-194 | 
| Cow position: | chr4:11872569-11872723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 38-194 | 
| Cow position: | chr4:22743667-22743512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 16, 62 | 
| Conread position: | 38-194 | 
| Cow position: | chr4:30508485-30508325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 38-194 | 
| Cow position: | chr4:61625303-61625459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 150, 61 | 
| Conread position: | 38-194 | 
| Cow position: | chr4:65918954-65918807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:3849886-3849722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 80, 44 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:5284557-5284717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 51, 85 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:11193237-11193081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 120, 62 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:14543154-14543309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:17833567-17833722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:19006774-19006616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:24020842-24021002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 134, 60 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:26548745-26548592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:33399189-33399349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 66, 42 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:47774310-47774469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 75, 54 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:58688617-58688775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 75, 43 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:61065947-61065795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:67600397-67600551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 38-197 | 
| Cow position: | chr4:68386807-68386647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 66, 42 | 
| Conread position: | 38-198 | 
| Cow position: | chr4:22014142-22014299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:1368789-1368947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:4419328-4419169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:6487086-6487249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:8674010-8673841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 58, 47 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:11107804-11107965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 74, 61 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:17919504-17919664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:21532300-21532458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:34700277-34700438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:37703596-37703435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 36, 54 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:54170707-54170544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 67, 22 | 
| Conread position: | 38-202 | 
| Cow position: | chr4:67652150-67652313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 38-203 | 
| Cow position: | chr4:43840699-43840864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 158, 61 | 
| Conread position: | 38-203 | 
| Cow position: | chr4:47252971-47253136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 75, 60 | 
| Conread position: | 38-203 | 
| Cow position: | chr4:49886012-49886174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 140, 43 | 
| Conread position: | 38-213 | 
| Cow position: | chr4:31348885-31349058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 39-182 | 
| Cow position: | chr4:1462127-1462275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 72, 59 | 
| Conread position: | 39-197 | 
| Cow position: | chr4:66174044-66174197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 39-202 | 
| Cow position: | chr4:4185448-4185294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 142, 50 | 
| Conread position: | 39-203 | 
| Cow position: | chr4:21364530-21364366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 23, 62 | 
| Conread position: | 39-208 | 
| Cow position: | chr4:8441965-8442137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 23, 34 | 
| Conread position: | 40-182 | 
| Cow position: | chr4:41189229-41189369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 40-202 | 
| Cow position: | chr4:16735592-16735431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 40-202 | 
| Cow position: | chr4:16967029-16967183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 41-142 | 
| Cow position: | chr4:8936150-8936050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 102 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 41-162 | 
| Cow position: | chr4:34210456-34210335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 76, 58 | 
| Conread position: | 41-197 | 
| Cow position: | chr4:10872062-10872220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 42-194 | 
| Cow position: | chr4:7048793-7048943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 42-202 | 
| Cow position: | chr4:39457947-39457788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 43-183 | 
| Cow position: | chr4:15814033-15814163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 43-197 | 
| Cow position: | chr4:8760557-8760404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 43-202 | 
| Cow position: | chr4:10424769-10424611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 44-202 | 
| Cow position: | chr4:26885646-26885804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 12, 56 | 
| Conread position: | 44-205 | 
| Cow position: | chr4:9445531-9445691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 45-197 | 
| Cow position: | chr4:34209370-34209219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 73, 54 | 
| Conread position: | 46-202 | 
| Cow position: | chr4:65581790-65581638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 49-202 | 
| Cow position: | chr4:59452247-59452399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 50-223 | 
| Cow position: | chr4:21258937-21258760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 68, 49 | 
| Conread position: | 51-194 | 
| Cow position: | chr4:18108107-18107968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 51-197 | 
| Cow position: | chr4:11201139-11200992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 25, 50 | 
| Conread position: | 53-197 | 
| Cow position: | chr4:10993015-10993157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 56-194 | 
| Cow position: | chr4:7806435-7806295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 71, 43 | 
| Conread position: | 56-201 | 
| Cow position: | chr4:65816400-65816539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 56-202 | 
| Cow position: | chr4:10205-10350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 112, 56 | 
| Conread position: | 58-191 | 
| Cow position: | chr4:14142587-14142455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 59-203 | 
| Cow position: | chr4:36755045-36754903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 67-202 | 
| Cow position: | chr4:67383530-67383396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 68-202 | 
| Cow position: | chr4:36074272-36074139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 70-197 | 
| Cow position: | chr4:23304091-23304217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 76-202 | 
| Cow position: | chr4:38153056-38153181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 85-203 | 
| Cow position: | chr4:54810612-54810729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
Show alignments to all cow chromosomes.
