Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037D06.5 |
| Conread position: | 10-566 |
| Cow position: | chr11:19062437-19063008 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 10-566 |
| Cow position: | chr11:32453471-32452892 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 10-566 |
| Cow position: | chr11:44517226-44517800 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 10-566 |
| Cow position: | chr11:53285536-53286103 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 375 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 10-566 |
| Cow position: | chr11:67844932-67845506 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 10-567 |
| Cow position: | chr11:54255077-54254507 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 359 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 11-182 |
| Cow position: | chr11:2963468-2963638 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 11-563 |
| Cow position: | chr11:49038739-49039312 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 378 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 15-565 |
| Cow position: | chr11:10849071-10848517 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 15-565 |
| Cow position: | chr11:26123290-26123865 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 382 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 16-370 |
| Cow position: | chr11:37802699-37802331 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 16-455 |
| Cow position: | chr11:32079157-32079614 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 303 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 16-475 |
| Cow position: | chr11:15986875-15986405 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 310 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-550 |
| Cow position: | chr11:30253856-30253313 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 362 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-550 |
| Cow position: | chr11:47737915-47738461 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 16-561 |
| Cow position: | chr11:27658069-27657499 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 381 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-564 |
| Cow position: | chr11:24394944-24394381 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-565 |
| Cow position: | chr11:19100859-19101428 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-565 |
| Cow position: | chr11:23881654-23881096 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 366 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 16-565 |
| Cow position: | chr11:26549158-26548590 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 368 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-565 |
| Cow position: | chr11:29666962-29667541 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 386 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-565 |
| Cow position: | chr11:41169073-41169631 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 16-565 |
| Cow position: | chr11:46779232-46779783 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 369 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-565 |
| Cow position: | chr11:72309406-72309973 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 364 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 16-566 |
| Cow position: | chr11:17106056-17106618 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-582 |
| Cow position: | chr11:76372404-76372954 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 362 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 16-585 |
| Cow position: | chr11:35253668-35254239 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 370 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-590 |
| Cow position: | chr11:43512996-43513585 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 16-601 |
| Cow position: | chr11:56488378-56487788 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 366 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 17-348 |
| Cow position: | chr11:21470428-21470105 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 17-370 |
| Cow position: | chr11:21888900-21889249 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 143, 46 |
| Conread position: | 17-371 |
| Cow position: | chr11:44042341-44041975 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 17-576 |
| Cow position: | chr11:26784883-26784308 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 17-622 |
| Cow position: | chr11:63274785-63275394 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 18-565 |
| Cow position: | chr11:17118716-17119279 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 369 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 27-566 |
| Cow position: | chr11:4192138-4191606 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 357 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 116, 5 |
| Conread position: | 43-367 |
| Cow position: | chr11:36087137-36087468 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 53-565 |
| Cow position: | chr11:66730676-66730150 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 55-585 |
| Cow position: | chr11:31927746-31927193 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 357 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 82 |
| Conread position: | 56-340 |
| Cow position: | chr11:3086430-3086723 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 56-564 |
| Cow position: | chr11:4026017-4026542 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 81 |
| Conread position: | 56-567 |
| Cow position: | chr11:31164266-31163758 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 351 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 58-349 |
| Cow position: | chr11:40405461-40405762 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 58-565 |
| Cow position: | chr11:9155573-9156085 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 334 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 58-565 |
| Cow position: | chr11:30122271-30122781 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 180 |
| Conread position: | 58-565 |
| Cow position: | chr11:44581750-44582277 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 58-584 |
| Cow position: | chr11:1488586-1489123 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 353 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 103, 89 |
| Conread position: | 59-543 |
| Cow position: | chr11:3856801-3856302 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 332 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 59-569 |
| Cow position: | chr11:35894319-35894843 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 348 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 63-361 |
| Cow position: | chr11:55483799-55483499 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 52 |
| Conread position: | 63-370 |
| Cow position: | chr11:76577858-76577538 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 64-525 |
| Cow position: | chr11:49238376-49238850 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 123 |
| Conread position: | 64-567 |
| Cow position: | chr11:58402094-58401581 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 338 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 97, 73 |
| Conread position: | 67-566 |
| Cow position: | chr11:15942801-15943302 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 338 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 75, 50 |
| Conread position: | 72-580 |
| Cow position: | chr11:75648287-75648792 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 88-473 |
| Cow position: | chr11:34455388-34455001 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 135, 49 |
| Conread position: | 104-567 |
| Cow position: | chr11:2881902-2882361 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 105-567 |
| Cow position: | chr11:35334665-35335137 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 301 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 53, 97 |
| Conread position: | 107-549 |
| Cow position: | chr11:46722969-46723410 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 110-564 |
| Cow position: | chr11:3103907-3104382 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 318 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 50, 320 |
| Conread position: | 119-550 |
| Cow position: | chr11:17280955-17281401 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 146-473 |
| Cow position: | chr11:42364214-42363881 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 148-561 |
| Cow position: | chr11:64356297-64355882 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 16, 152 |
| Conread position: | 157-585 |
| Cow position: | chr11:27668503-27668951 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 292 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 179-557 |
| Cow position: | chr11:43007545-43007168 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 184, 48 |
| Conread position: | 179-566 |
| Cow position: | chr11:12387868-12387490 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 180-565 |
| Cow position: | chr11:58135843-58135459 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 180-565 |
| Cow position: | chr11:71331060-71330660 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 223 |
| Conread position: | 180-567 |
| Cow position: | chr11:38833993-38834386 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 171, 44 |
| Conread position: | 228-529 |
| Cow position: | chr11:16984808-16985114 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 228-566 |
| Cow position: | chr11:31754649-31754980 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 11, 101 |
| Conread position: | 229-566 |
| Cow position: | chr11:21475531-21475187 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 121, 177 |
| Conread position: | 229-567 |
| Cow position: | chr11:9302028-9302375 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 98 |
| Conread position: | 229-578 |
| Cow position: | chr11:24095508-24095863 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 146, 23 |
| Conread position: | 231-569 |
| Cow position: | chr11:26073561-26073904 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 169 |
| Conread position: | 235-593 |
| Cow position: | chr11:21849121-21849484 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 237-550 |
| Cow position: | chr11:9168177-9168479 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 237-567 |
| Cow position: | chr11:44049924-44049584 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 320 |
| Conread position: | 239-551 |
| Cow position: | chr11:50948926-50949248 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 87, 175 |
| Conread position: | 240-582 |
| Cow position: | chr11:30208528-30208185 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 117, 163 |
| Conread position: | 245-566 |
| Cow position: | chr11:8839058-8839383 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 106, 7 |
| Conread position: | 247-370 |
| Cow position: | chr11:85653098-85652974 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 256-565 |
| Cow position: | chr11:11989513-11989198 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 260-583 |
| Cow position: | chr11:32686251-32685932 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 268-566 |
| Cow position: | chr11:52420763-52420467 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 111 |
| Conread position: | 282-586 |
| Cow position: | chr11:40506762-40507061 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 104 |
| Conread position: | 292-562 |
| Cow position: | chr11:40774667-40774930 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 293-561 |
| Cow position: | chr11:29060554-29060820 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 77 |
| Conread position: | 315-560 |
| Cow position: | chr11:25865538-25865771 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 230, 47 |
| Conread position: | 329-562 |
| Cow position: | chr11:28673442-28673673 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 339-549 |
| Cow position: | chr11:2358646-2358445 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 373-544 |
| Cow position: | chr11:45921354-45921522 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 373-601 |
| Cow position: | chr11:9974652-9974876 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 379-566 |
| Cow position: | chr11:44156013-44156199 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 510-811 |
| Cow position: | chr11:35153572-35153870 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 537-816 |
| Cow position: | chr11:69978188-69977920 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 168, 43 |
| Conread position: | 539-816 |
| Cow position: | chr11:80923102-80923372 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 541-813 |
| Cow position: | chr11:2907314-2907571 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 543-816 |
| Cow position: | chr11:62620595-62620323 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 548-805 |
| Cow position: | chr11:62239957-62239705 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 5, 75 |
| Conread position: | 552-816 |
| Cow position: | chr11:35212959-35213219 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 554-805 |
| Cow position: | chr11:52380664-52380912 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 554-812 |
| Cow position: | chr11:11125879-11125616 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 556-806 |
| Cow position: | chr11:48296227-48295992 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 137, 25 |
| Conread position: | 556-812 |
| Cow position: | chr11:5961509-5961256 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 133, 26 |
| Conread position: | 556-815 |
| Cow position: | chr11:2575702-2575954 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 556-816 |
| Cow position: | chr11:8437486-8437746 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 557-812 |
| Cow position: | chr11:34646803-34646542 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 559-805 |
| Cow position: | chr11:7874344-7874098 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 559-806 |
| Cow position: | chr11:27404868-27405111 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 559-816 |
| Cow position: | chr11:44032208-44031956 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 146, 29 |
| Conread position: | 561-806 |
| Cow position: | chr11:19487277-19487522 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 562-815 |
| Cow position: | chr11:17721604-17721852 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 563-808 |
| Cow position: | chr11:53773879-53773638 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 568-812 |
| Cow position: | chr11:49872693-49872932 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 569-815 |
| Cow position: | chr11:42159869-42160105 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 232, 44 |
| Conread position: | 573-805 |
| Cow position: | chr11:27747110-27746883 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 573-812 |
| Cow position: | chr11:50152625-50152861 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 15 |
| Conread position: | 573-813 |
| Cow position: | chr11:18924936-18924697 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 573-814 |
| Cow position: | chr11:52297036-52297266 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 573-816 |
| Cow position: | chr11:63998902-63999139 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 574-812 |
| Cow position: | chr11:15017245-15017011 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 14 |
| Conread position: | 574-812 |
| Cow position: | chr11:46922699-46922933 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 47 |
| Conread position: | 574-816 |
| Cow position: | chr11:18852090-18851857 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 574-816 |
| Cow position: | chr11:40608405-40608644 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 575-814 |
| Cow position: | chr11:20238863-20238627 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 575-815 |
| Cow position: | chr11:1625036-1625274 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 575-816 |
| Cow position: | chr11:66188135-66188369 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 168, 16 |
| Conread position: | 582-795 |
| Cow position: | chr11:30494171-30493966 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 584-814 |
| Cow position: | chr11:45435253-45435030 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 590-806 |
| Cow position: | chr11:1932316-1932533 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 590-813 |
| Cow position: | chr11:21886002-21885784 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 590-814 |
| Cow position: | chr11:17036360-17036577 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 590-815 |
| Cow position: | chr11:13592911-13592685 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 31 |
| Conread position: | 590-816 |
| Cow position: | chr11:35580433-35580208 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 31 |
| Conread position: | 590-816 |
| Cow position: | chr11:80564469-80564241 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 78, 31 |
| Conread position: | 591-803 |
| Cow position: | chr11:72292732-72292514 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 591-811 |
| Cow position: | chr11:77319583-77319368 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 591-816 |
| Cow position: | chr11:4637004-4637223 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 595-811 |
| Cow position: | chr11:32199110-32198890 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 595-816 |
| Cow position: | chr11:63435689-63435472 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 596-806 |
| Cow position: | chr11:62889726-62889935 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 602-805 |
| Cow position: | chr11:39499515-39499316 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 19 |
| Conread position: | 618-812 |
| Cow position: | chr11:3393069-3393256 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 618-815 |
| Cow position: | chr11:30192326-30192125 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 618-816 |
| Cow position: | chr11:45646448-45646644 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 620-816 |
| Cow position: | chr11:34121341-34121147 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 639-815 |
| Cow position: | chr11:26845471-26845644 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 651-816 |
| Cow position: | chr11:41293706-41293869 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 660-816 |
| Cow position: | chr11:16342124-16342280 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.