Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037D06.5
        

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               6-585
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               384
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               10-583
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               374
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               125, 53
               

               Conread position:
               16-557
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               355
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-563
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               370
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               360
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               362
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               16-576
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-582
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               383
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 47
               

               Conread position:
               16-588
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               375
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               16-620
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-625
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 23
               

               Conread position:
               16-626
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               393
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               20, 241
               

               Conread position:
               17-565
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               362
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               18-585
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               365
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               140, 17
               

               Conread position:
               20-584
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 43
               

               Conread position:
               45-543
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               337
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 155
               

               Conread position:
               58-327
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               85, 47
               

               Conread position:
               58-370
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               58-566
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 80
               

               Conread position:
               60-565
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               356
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 205
               

               Conread position:
               63-369
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               63-370
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               93, 127
               

               Conread position:
               63-595
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               350
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               63-612
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               368
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               67-596
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               341
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               69, 77
               

               Conread position:
               72-580
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               73-544
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               318
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               85, 249
               

               Conread position:
               75-474
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 62
               

               Conread position:
               75-563
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               331
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               81-566
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               334
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               82-370
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               99, 49
               

               Conread position:
               96-566
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               98-370
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               180-334
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               180-550
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               147, 41
               

               Conread position:
               180-565
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               134, 31
               

               Conread position:
               180-576
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               177, 40
               

               Conread position:
               228-592
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 6
               

               Conread position:
               229-627
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 147
               

               Conread position:
               234-592
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               95, 121
               

               Conread position:
               242-580
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               34, 74
               

               Conread position:
               243-560
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               111, 215
               

               Conread position:
               244-566
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 41
               

               Conread position:
               247-563
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               111, 53
               

               Conread position:
               256-563
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 148
               

               Conread position:
               256-565
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               95, 158
               

               Conread position:
               257-576
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               264-565
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               94, 147
               

               Conread position:
               269-565
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 199
               

               Conread position:
               274-585
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 137
               

               Conread position:
               289-549
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 97
               

               Conread position:
               296-548
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               302-620
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               524-812
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               538-811
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               542-776
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               545-806
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               160, 66
               

               Conread position:
               553-772
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               554-816
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 122
               

               Conread position:
               554-816
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               254, 19
               

               Conread position:
               554-816
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               556-784
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               556-812
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               557-812
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               558-806
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               561-806
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               125, 21
               

               Conread position:
               563-773
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               563-816
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               564-812
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               564-812
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               571-816
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               573-816
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               574-812
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               128, 43
               

               Conread position:
               576-802
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               576-806
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               576-815
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               576-816
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               582-812
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               583-815
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               584-808
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               584-813
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               585-813
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               120, 36
               

               Conread position:
               588-811
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               588-816
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               590-802
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               590-812
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               590-812
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               590-813
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               590-816
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               592-811
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               595-815
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               213, 11
               

               Conread position:
               595-816
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               596-806
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               600-816
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               618-808
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               618-812
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               649-806
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               649-812
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 0
               
Show alignments to all cow chromosomes.