Cow genome map

Conread name: Ss1.1-Pig4-TMW8037D06.5

Conread position: 10-506
Cow position: chr14:17489758-17490273 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 338
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 34

Conread position: 10-560
Cow position: chr14:25364940-25365477 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 349
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 7, 34

Conread position: 10-565
Cow position: chr14:752147-751574 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position: chr14:2287847-2287273 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 370
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 34

Conread position: 10-580
Cow position: chr14:13862521-13863103 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 33

Conread position: 11-584
Cow position: chr14:17759322-17759900 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 384
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 12, 34

Conread position: 12-361
Cow position: chr14:19460715-19461061 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 146, 51

Conread position: 13-564
Cow position: chr14:33605359-33605913 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 26

Conread position: 13-567
Cow position: chr14:16342323-16342891 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 340
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 30

Conread position: 16-360
Cow position: chr14:46503264-46502924 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 167, 23

Conread position: 16-447
Cow position: chr14:38228137-38228548 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 278
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 207, 47

Conread position: 16-477
Cow position: chr14:41411322-41410849 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 307
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 27

Conread position: 16-513
Cow position: chr14:37225731-37225216 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 340
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 127, 47

Conread position: 16-564
Cow position: chr14:43559806-43559244 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 369
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr14:5514508-5513938 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 363
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 20, 140

Conread position: 16-565
Cow position: chr14:5530633-5530065 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 16-565
Cow position: chr14:13579932-13579388 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 358
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr14:13780524-13779959 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 369
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr14:16999475-17000049 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 375
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 127, 47

Conread position: 16-565
Cow position: chr14:20784042-20783475 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr14:32448531-32447970 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 369
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr14:44290638-44290073 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-566
Cow position: chr14:5075511-5074956 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 16-566
Cow position: chr14:13834714-13834142 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 362
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 23

Conread position: 16-566
Cow position: chr14:23255785-23256357 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 370
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 38

Conread position: 16-576
Cow position: chr14:191624-191037 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 384
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 23

Conread position: 16-576
Cow position: chr14:47643863-47643288 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 365
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 38

Conread position: 16-585
Cow position: chr14:7473925-7473340 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 375
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-585
Cow position: chr14:12611966-12611393 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 378
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 27

Conread position: 16-585
Cow position: chr14:19326688-19327274 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-598
Cow position: chr14:48252754-48253334 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 391
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 127, 23

Conread position: 16-619
Cow position: chr14:45710162-45710778 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 20

Conread position: 17-370
Cow position: chr14:42122007-42122366 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 26

Conread position: 17-601
Cow position: chr14:44553402-44552808 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 46

Conread position: 18-370
Cow position: chr14:20911487-20911128 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 67, 45

Conread position: 18-533
Cow position: chr14:35425686-35425160 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 312
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 45

Conread position: 18-584
Cow position: chr14:34046496-34045937 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 359
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 32

Conread position: 27-561
Cow position: chr14:45677527-45678071 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 352
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 9, 16

Conread position: 44-469
Cow position: chr14:41476305-41475888 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 288
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 151

Conread position: 50-471
Cow position: chr14:32702407-32701949 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 303
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 96

Conread position: 52-567
Cow position: chr14:33678601-33678065 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 354
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 104, 20

Conread position: 54-591
Cow position: chr14:45670492-45671050 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 83

Conread position: 55-533
Cow position: chr14:28123491-28123968 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 314
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 128, 82

Conread position: 55-556
Cow position: chr14:45027466-45027989 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 338
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 101, 20

Conread position: 56-565
Cow position: chr14:44774537-44775033 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 331
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 87, 262

Conread position: 57-370
Cow position: chr14:25693473-25693157 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 99, 145

Conread position: 57-561
Cow position: chr14:44255247-44255747 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 336
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 97, 12

Conread position: 57-576
Cow position: chr14:48600817-48601349 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 327
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 101, 315

Conread position: 59-557
Cow position: chr14:45188276-45188792 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 328
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 196

Conread position: 60-584
Cow position: chr14:24523460-24522923 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 367
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 61

Conread position: 63-567
Cow position: chr14:24996090-24996588 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 332
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 73, 25

Conread position: 63-611
Cow position: chr14:18105949-18105388 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 119

Conread position: 65-507
Cow position: chr14:21745603-21745152 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 293
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 53

Conread position: 73-565
Cow position: chr14:11152633-11153142 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 328
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 88, 405

Conread position: 89-585
Cow position: chr14:22029948-22030459 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 329
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 71, 97

Conread position: 105-559
Cow position: chr14:18417991-18417519 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 309
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 321

Conread position: 180-584
Cow position: chr14:35930983-35930582 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 267
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 177, 39

Conread position: 180-585
Cow position: chr14:17687893-17687486 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 269
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 78, 47

Conread position: 227-541
Cow position: chr14:9102884-9102562 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 213
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 91

Conread position: 229-566
Cow position: chr14:12123829-12124176 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 82, 78

Conread position: 229-592
Cow position: chr14:34067198-34066849 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 195, 100

Conread position: 230-566
Cow position: chr14:13090194-13089860 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 46, 20

Conread position: 249-572
Cow position: chr14:47939648-47939975 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 78

Conread position: 256-575
Cow position: chr14:12340335-12340658 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 47

Conread position: 274-560
Cow position: chr14:33402988-33402696 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 45

Conread position: 277-561
Cow position: chr14:37454642-37454918 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 109

Conread position: 286-566
Cow position: chr14:10148171-10147881 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 21

Conread position: 340-563
Cow position: chr14:50139792-50139573 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 130, 28

Conread position: 347-565
Cow position: chr14:44690287-44690079 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 16

Conread position: 373-565
Cow position: chr14:50112001-50111809 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 29

Conread position: 547-816
Cow position: chr14:13845801-13846061 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 36

Conread position: 549-816
Cow position: chr14:25903344-25903607 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 75

Conread position: 555-806
Cow position: chr14:33751358-33751600 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 16

Conread position: 555-816
Cow position: chr14:29734543-29734288 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 52

Conread position: 556-773
Cow position: chr14:47224550-47224333 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 30

Conread position: 556-808
Cow position: chr14:3949286-3949033 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 67

Conread position: 556-811
Cow position: chr14:22988854-22989104 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 66

Conread position: 556-816
Cow position: chr14:45677054-45677305 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 242, 18

Conread position: 557-812
Cow position: chr14:21357381-21357628 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 240, 25

Conread position: 557-814
Cow position: chr14:20640806-20640556 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 560-805
Cow position: chr14:4848174-4848412 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 86, 46

Conread position: 561-816
Cow position: chr14:20826314-20826564 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 62

Conread position: 563-814
Cow position: chr14:1803293-1803040 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 59

Conread position: 564-811
Cow position: chr14:48838416-48838666 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 571-816
Cow position: chr14:28924000-28924243 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 573-813
Cow position: chr14:36254851-36254623 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 573-813
Cow position: chr14:41749919-41749687 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 132, 48

Conread position: 574-816
Cow position: chr14:10937507-10937756 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 48

Conread position: 576-804
Cow position: chr14:11576908-11577132 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 46

Conread position: 576-816
Cow position: chr14:21224480-21224714 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 48

Conread position: 576-816
Cow position: chr14:28115351-28115111 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 122

Conread position: 578-811
Cow position: chr14:10078095-10078339 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 44

Conread position: 590-816
Cow position: chr14:48426926-48427147 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 31

Conread position: 591-790
Cow position: chr14:32784263-32784066 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 591-816
Cow position: chr14:16760254-16760475 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 127, 30

Conread position: 595-816
Cow position: chr14:33791052-33791264 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 601-816
Cow position: chr14:1646319-1646110 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 16

Conread position: 618-811
Cow position: chr14:24945616-24945420 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 59

Show alignments to all cow chromosomes.