Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037D06.5
        

               Conread position:
               10-506
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-560
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               349
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-565
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               370
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-580
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               11-584
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               384
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               12-361
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               146, 51
               

               Conread position:
               13-564
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 26
               

               Conread position:
               13-567
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               340
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               16-360
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               167, 23
               

               Conread position:
               16-447
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               207, 47
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               307
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-513
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               340
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               369
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               363
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               20, 140
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               358
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               369
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               375
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               369
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               362
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 23
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               370
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-576
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               384
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               16-576
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               365
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               375
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               378
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-598
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               391
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               127, 23
               

               Conread position:
               16-619
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               17-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               17-601
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               18-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               18-533
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               80, 45
               

               Conread position:
               18-584
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               359
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               125, 32
               

               Conread position:
               27-561
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               352
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               44-469
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               24, 151
               

               Conread position:
               50-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               52-567
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               354
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               104, 20
               

               Conread position:
               54-591
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 83
               

               Conread position:
               55-533
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               314
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               128, 82
               

               Conread position:
               55-556
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               338
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               56-565
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               331
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               87, 262
               

               Conread position:
               57-370
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 145
               

               Conread position:
               57-561
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               336
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               97, 12
               

               Conread position:
               57-576
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               327
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               101, 315
               

               Conread position:
               59-557
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               328
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 196
               

               Conread position:
               60-584
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               367
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 61
               

               Conread position:
               63-567
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               332
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               63-611
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 119
               

               Conread position:
               65-507
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               293
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               73-565
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               328
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               88, 405
               

               Conread position:
               89-585
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               329
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               71, 97
               

               Conread position:
               105-559
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               309
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 321
               

               Conread position:
               180-584
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               177, 39
               

               Conread position:
               180-585
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               78, 47
               

               Conread position:
               227-541
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 91
               

               Conread position:
               229-566
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               82, 78
               

               Conread position:
               229-592
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               195, 100
               

               Conread position:
               230-566
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               249-572
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 78
               

               Conread position:
               256-575
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               274-560
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               277-561
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               79, 109
               

               Conread position:
               286-566
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 21
               

               Conread position:
               340-563
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               130, 28
               

               Conread position:
               347-565
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               138, 16
               

               Conread position:
               373-565
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 29
               

               Conread position:
               547-816
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               549-816
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               25, 75
               

               Conread position:
               555-806
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               555-816
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               556-773
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               556-808
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               556-811
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               556-816
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               242, 18
               

               Conread position:
               557-812
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               240, 25
               

               Conread position:
               557-814
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               560-805
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               561-816
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               6, 62
               

               Conread position:
               563-814
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               564-811
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               571-816
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               573-813
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               573-813
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               132, 48
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               576-804
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               576-816
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               576-816
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 122
               

               Conread position:
               578-811
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               590-816
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               591-790
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               591-816
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               127, 30
               

               Conread position:
               595-816
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               601-816
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               618-811
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 59
               
Show alignments to all cow chromosomes.