Cow genome map

Conread name: Ss1.1-Pig4-TMW8037D06.5

Conread position: 3-565
Cow position:
Alignm length: 588
Alignm identity: 376
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 133, 60

Conread position: 6-565
Cow position:
Alignm length: 591
Alignm identity: 385
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 11, 38

Conread position: 6-567
Cow position:
Alignm length: 584
Alignm identity: 366
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 11, 37

Conread position: 10-370
Cow position:
Alignm length: 373
Alignm identity: 258
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 9, 54

Conread position: 10-465
Cow position:
Alignm length: 483
Alignm identity: 314
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 34

Conread position: 10-549
Cow position:
Alignm length: 560
Alignm identity: 356
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 54

Conread position: 10-565
Cow position:
Alignm length: 583
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position:
Alignm length: 583
Alignm identity: 356
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 33

Conread position: 10-566
Cow position:
Alignm length: 584
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 11-530
Cow position:
Alignm length: 531
Alignm identity: 339
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 169, 21

Conread position: 11-668
Cow position:
Alignm length: 679
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 23

Conread position: 13-370
Cow position:
Alignm length: 371
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 50

Conread position: 13-564
Cow position:
Alignm length: 567
Alignm identity: 357
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 29, 40

Conread position: 16-349
Cow position:
Alignm length: 348
Alignm identity: 230
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 38

Conread position: 16-366
Cow position:
Alignm length: 372
Alignm identity: 243
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 23

Conread position: 16-475
Cow position:
Alignm length: 485
Alignm identity: 307
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 27

Conread position: 16-560
Cow position:
Alignm length: 564
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 23

Conread position: 16-561
Cow position:
Alignm length: 577
Alignm identity: 370
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 27

Conread position: 16-563
Cow position:
Alignm length: 572
Alignm identity: 375
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 568
Alignm identity: 360
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 127, 78

Conread position: 16-565
Cow position:
Alignm length: 579
Alignm identity: 379
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 23

Conread position: 16-565
Cow position:
Alignm length: 576
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 580
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 576
Alignm identity: 369
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 38

Conread position: 16-565
Cow position:
Alignm length: 564
Alignm identity: 367
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 584
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 575
Alignm identity: 361
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 575
Alignm identity: 367
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 133, 47

Conread position: 16-565
Cow position:
Alignm length: 573
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 573
Alignm identity: 369
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 39, 23

Conread position: 16-582
Cow position:
Alignm length: 598
Alignm identity: 383
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-582
Cow position:
Alignm length: 581
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 47

Conread position: 16-623
Cow position:
Alignm length: 638
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 18-550
Cow position:
Alignm length: 550
Alignm identity: 347
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 22

Conread position: 18-565
Cow position:
Alignm length: 562
Alignm identity: 360
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 26

Conread position: 18-565
Cow position:
Alignm length: 575
Alignm identity: 374
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 25

Conread position: 54-561
Cow position:
Alignm length: 539
Alignm identity: 344
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 83, 364

Conread position: 54-565
Cow position:
Alignm length: 543
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 56-586
Cow position:
Alignm length: 552
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 52

Conread position: 57-318
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 85, 60

Conread position: 57-354
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 157

Conread position: 57-565
Cow position:
Alignm length: 524
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 80

Conread position: 57-565
Cow position:
Alignm length: 530
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 80

Conread position: 57-567
Cow position:
Alignm length: 539
Alignm identity: 360
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 91, 49

Conread position: 58-568
Cow position:
Alignm length: 547
Alignm identity: 351
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 80

Conread position: 58-582
Cow position:
Alignm length: 538
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 34

Conread position: 58-582
Cow position:
Alignm length: 544
Alignm identity: 340
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 35

Conread position: 58-605
Cow position:
Alignm length: 573
Alignm identity: 355
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 79

Conread position: 59-565
Cow position:
Alignm length: 539
Alignm identity: 348
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 74

Conread position: 59-565
Cow position:
Alignm length: 532
Alignm identity: 348
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 79

Conread position: 59-586
Cow position:
Alignm length: 548
Alignm identity: 358
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 51, 24

Conread position: 63-564
Cow position:
Alignm length: 551
Alignm identity: 362
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 68

Conread position: 64-564
Cow position:
Alignm length: 526
Alignm identity: 339
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 194

Conread position: 64-582
Cow position:
Alignm length: 534
Alignm identity: 340
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 95, 18

Conread position: 68-367
Cow position:
Alignm length: 310
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 69

Conread position: 75-620
Cow position:
Alignm length: 574
Alignm identity: 357
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 11

Conread position: 89-448
Cow position:
Alignm length: 374
Alignm identity: 242
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 84

Conread position: 106-566
Cow position:
Alignm length: 483
Alignm identity: 305
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 31

Conread position: 136-563
Cow position:
Alignm length: 441
Alignm identity: 276
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 123

Conread position: 180-533
Cow position:
Alignm length: 365
Alignm identity: 236
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 176, 47

Conread position: 180-565
Cow position:
Alignm length: 396
Alignm identity: 259
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 181, 44

Conread position: 228-566
Cow position:
Alignm length: 354
Alignm identity: 231
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 70

Conread position: 229-531
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 35

Conread position: 229-566
Cow position:
Alignm length: 349
Alignm identity: 226
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 122, 176

Conread position: 229-650
Cow position:
Alignm length: 445
Alignm identity: 293
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 23, 53

Conread position: 230-525
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 177

Conread position: 238-476
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 118, 57

Conread position: 242-455
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 114, 61

Conread position: 242-533
Cow position:
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 14

Conread position: 242-576
Cow position:
Alignm length: 348
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 226

Conread position: 242-590
Cow position:
Alignm length: 359
Alignm identity: 235
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 116, 87

Conread position: 247-588
Cow position:
Alignm length: 349
Alignm identity: 224
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 109, 124

Conread position: 250-595
Cow position:
Alignm length: 351
Alignm identity: 230
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 47

Conread position: 269-592
Cow position:
Alignm length: 336
Alignm identity: 223
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 260

Conread position: 273-565
Cow position:
Alignm length: 304
Alignm identity: 197
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 131

Conread position: 279-596
Cow position:
Alignm length: 327
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 253

Conread position: 368-565
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 94, 34

Conread position: 378-620
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 379-565
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 23

Conread position: 512-812
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 52

Conread position: 531-760
Cow position:
Alignm length: 233
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 16

Conread position: 541-812
Cow position:
Alignm length: 277
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 83

Conread position: 543-812
Cow position:
Alignm length: 270
Alignm identity: 176
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 553-811
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 107, 68

Conread position: 556-813
Cow position:
Alignm length: 261
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 65

Conread position: 556-816
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 146, 14

Conread position: 556-816
Cow position:
Alignm length: 269
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 26

Conread position: 557-804
Cow position:
Alignm length: 249
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 16

Conread position: 558-810
Cow position:
Alignm length: 255
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 64

Conread position: 559-807
Cow position:
Alignm length: 251
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 177, 29

Conread position: 559-811
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 566-795
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 60

Conread position: 570-811
Cow position:
Alignm length: 242
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 573-815
Cow position:
Alignm length: 244
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 15

Conread position: 573-816
Cow position:
Alignm length: 247
Alignm identity: 166
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 48

Conread position: 574-784
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 49

Conread position: 574-795
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 47

Conread position: 574-811
Cow position:
Alignm length: 238
Alignm identity: 157
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 574-816
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 131, 46

Conread position: 575-813
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 575-815
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 91, 13

Conread position: 575-816
Cow position:
Alignm length: 242
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 575-816
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 13

Conread position: 576-807
Cow position:
Alignm length: 233
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 46

Conread position: 576-816
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 576-816
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 580-811
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 41

Conread position: 581-815
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 41

Conread position: 584-816
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 588-804
Cow position:
Alignm length: 218
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 33

Conread position: 588-811
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 25

Conread position: 590-812
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 32

Conread position: 590-816
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 142, 31

Conread position: 591-780
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 30

Conread position: 591-811
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 595-816
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 596-815
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 25

Conread position: 599-805
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 618-804
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 618-812
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 69

Conread position: 618-812
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 48

Conread position: 618-816
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 43

Conread position: 618-816
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 128

Conread position: 651-816
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 652-812
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 657-816
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Show alignments to all cow chromosomes.