Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037D06.5
        

               Conread position:
               6-441
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               154, 57
               

               Conread position:
               6-561
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               375
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               10-370
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               10-370
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               16-348
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               375
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               370
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-576
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               384
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               18-349
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               140, 45
               

               Conread position:
               18-620
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               400
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               54-565
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               343
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               55-556
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               55-566
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 52
               

               Conread position:
               56-593
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               358
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               76, 160
               

               Conread position:
               58-414
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               58-550
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               58-561
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               340
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               44, 49
               

               Conread position:
               58-567
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               344
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               9, 149
               

               Conread position:
               59-550
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               63-473
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               63-473
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 77
               

               Conread position:
               75-565
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               88-565
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               328
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               14, 19
               

               Conread position:
               94-563
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               328
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               149-539
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               180-429
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               181, 30
               

               Conread position:
               180-623
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 32
               

               Conread position:
               227-561
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               124, 21
               

               Conread position:
               228-601
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               130, 155
               

               Conread position:
               229-370
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               77, 30
               

               Conread position:
               236-561
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               120, 36
               

               Conread position:
               237-422
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               119, 15
               

               Conread position:
               237-526
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               119, 58
               

               Conread position:
               241-352
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               242-550
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               114, 228
               

               Conread position:
               247-566
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               103, 161
               

               Conread position:
               263-561
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               14, 124
               

               Conread position:
               266-564
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               79, 146
               

               Conread position:
               267-561
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               90, 141
               

               Conread position:
               268-561
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               73, 132
               

               Conread position:
               274-575
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               283-565
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 131
               

               Conread position:
               288-560
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 105
               

               Conread position:
               296-576
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 89
               

               Conread position:
               320-568
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 242
               

               Conread position:
               528-784
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               535-812
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               536-816
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               537-808
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 86
               

               Conread position:
               546-816
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               546-816
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               547-806
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 75
               

               Conread position:
               554-795
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               554-816
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               555-816
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 66
               

               Conread position:
               556-797
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               556-816
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               556-816
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               557-814
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 60
               

               Conread position:
               558-796
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               130, 63
               

               Conread position:
               560-806
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               560-812
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               560-816
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               146, 20
               

               Conread position:
               563-801
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               566-814
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               572-813
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               235, 49
               

               Conread position:
               573-805
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               573-812
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               74, 15
               

               Conread position:
               573-813
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               573-816
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               574-804
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               574-805
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               159, 14
               

               Conread position:
               574-806
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               574-812
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 49
               

               Conread position:
               574-812
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 8
               

               Conread position:
               574-812
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               574-815
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 51
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               131, 45
               

               Conread position:
               575-795
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               575-813
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               575-816
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               160, 46
               

               Conread position:
               576-816
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               577-815
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               578-805
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               578-816
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 44
               

               Conread position:
               590-780
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               590-809
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               591-816
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               595-810
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               595-812
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               611-805
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               618-812
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               618-816
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               134, 55
               

               Conread position:
               620-816
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               651-813
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               652-816
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               152, 32
               
Show alignments to all cow chromosomes.