Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037D06.5
        

               Conread position:
               5-565
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               373
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               358
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               6-565
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               375
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               368
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               106, 66
               

               Conread position:
               10-361
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-556
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               10-556
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               10-565
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-567
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               358
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               133, 58
               

               Conread position:
               11-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               132, 52
               

               Conread position:
               11-586
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               387
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               145, 29
               

               Conread position:
               13-317
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               134, 50
               

               Conread position:
               16-361
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               127, 39
               

               Conread position:
               16-370
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-370
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               16-441
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               139, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               368
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               373
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 47
               

               Conread position:
               16-586
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               387
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               16-596
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               380
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               17-620
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               409
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               20-552
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               348
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               48-546
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               56-567
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               353
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               87, 81
               

               Conread position:
               57-582
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               58-561
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 357
               

               Conread position:
               58-565
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 368
               

               Conread position:
               58-565
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               340
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               9, 343
               

               Conread position:
               63-582
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               350
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               67-561
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               327
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               116, 5
               

               Conread position:
               75-370
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               76-472
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               82, 175
               

               Conread position:
               81-565
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               325
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               82-569
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               316
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               73, 46
               

               Conread position:
               88-566
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               342
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               55, 40
               

               Conread position:
               94-370
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               98-566
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               317
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               51, 5
               

               Conread position:
               128-472
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               143-620
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               322
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               180-565
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               178, 44
               

               Conread position:
               181-550
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               177, 42
               

               Conread position:
               228-576
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               340, 109
               

               Conread position:
               237-438
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               135, 5
               

               Conread position:
               245-567
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               112, 27
               

               Conread position:
               248-620
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               109, 24
               

               Conread position:
               257-565
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               94, 12
               

               Conread position:
               268-566
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               87, 146
               

               Conread position:
               269-567
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               87, 127
               

               Conread position:
               277-585
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 63
               

               Conread position:
               280-550
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               74, 127
               

               Conread position:
               285-567
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               90, 18
               

               Conread position:
               290-544
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               294-578
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 81
               

               Conread position:
               298-519
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 177
               

               Conread position:
               370-565
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               546-812
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               554-816
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               555-806
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               556-810
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 71
               

               Conread position:
               556-815
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               132, 69
               

               Conread position:
               557-812
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               559-815
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               560-815
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               560-816
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               145, 22
               

               Conread position:
               562-797
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               563-807
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               564-816
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               141, 28
               

               Conread position:
               565-812
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               140, 56
               

               Conread position:
               571-816
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               573-816
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               574-806
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 47
               

               Conread position:
               574-812
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 42
               

               Conread position:
               574-814
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               574-814
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               575-811
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               575-816
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               111, 46
               

               Conread position:
               575-816
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               576-802
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               576-806
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               576-806
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               576-809
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               576-813
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               576-816
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 47
               

               Conread position:
               577-806
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               8, 45
               

               Conread position:
               579-812
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               39, 46
               

               Conread position:
               579-814
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               582-805
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               590-800
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               167, 31
               

               Conread position:
               590-806
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               590-816
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               591-816
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               611-816
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               651-811
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 22
               
Show alignments to all cow chromosomes.