Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037D06.5
        

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               384
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               10-565
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               10-586
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 104
               

               Conread position:
               10-590
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               378
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               8, 45
               

               Conread position:
               13-578
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               380
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               15-564
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               364
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               16-325
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               16-475
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               303
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               17, 13
               

               Conread position:
               16-531
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               344
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               352
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               372
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               128, 24
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-601
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               18-525
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               334
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               133, 22
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               368
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               375
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               372
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               22-474
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               48-409
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               55-371
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 52
               

               Conread position:
               55-627
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               349
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               58-582
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               352
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               79, 359
               

               Conread position:
               58-586
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               346
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               60-565
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               347
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               63-576
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               342
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               68-565
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               329
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               81, 69
               

               Conread position:
               68-582
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 30
               

               Conread position:
               88-611
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               332
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               213, 51
               

               Conread position:
               148-507
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 6
               

               Conread position:
               149-349
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 79
               

               Conread position:
               155-370
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 137
               

               Conread position:
               179-539
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               193, 53
               

               Conread position:
               180-561
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               173, 41
               

               Conread position:
               228-550
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               129, 6
               

               Conread position:
               229-563
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 195
               

               Conread position:
               237-533
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               237-585
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               119, 168
               

               Conread position:
               241-566
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               49, 160
               

               Conread position:
               242-561
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               114, 215
               

               Conread position:
               256-582
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               102, 158
               

               Conread position:
               264-564
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 15
               

               Conread position:
               286-586
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 99
               

               Conread position:
               368-596
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               537-759
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 36
               

               Conread position:
               545-816
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               148, 35
               

               Conread position:
               554-812
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               555-806
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               555-811
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               556-802
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               556-806
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               162, 24
               

               Conread position:
               556-816
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               557-805
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               558-797
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 22
               

               Conread position:
               558-800
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               559-813
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               560-813
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 11
               

               Conread position:
               560-816
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               562-806
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               563-811
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               568-800
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               571-811
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               154, 50
               

               Conread position:
               571-812
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               573-804
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 38
               

               Conread position:
               573-806
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               573-812
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               574-804
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               574-815
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               574-815
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               188, 47
               

               Conread position:
               575-815
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               582-816
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               586-784
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               589-811
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               590-779
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               590-789
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               115, 24
               

               Conread position:
               590-812
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               590-813
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 31
               

               Conread position:
               590-814
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               590-816
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               114, 31
               

               Conread position:
               590-816
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               590-816
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               591-762
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               591-816
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               595-806
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               599-814
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               619-804
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 92
               

               Conread position:
               654-816
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.