Cow genome map

Conread name: Ss1.1-Pig4-TMW8037D06.5

Conread position: 5-563
Cow position: chr19:39666525-39667087 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 384
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 12, 39

Conread position: 10-565
Cow position: chr19:5730865-5730305 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position: chr19:52149657-52150233 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 45

Conread position: 10-586
Cow position: chr19:5677780-5678360 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 104

Conread position: 10-590
Cow position: chr19:23400234-23400800 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 378
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 45

Conread position: 13-578
Cow position: chr19:774625-774041 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 380
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 30

Conread position: 15-564
Cow position: chr19:174280-173709 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 364
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 28

Conread position: 16-325
Cow position: chr19:1489052-1489370 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 25

Conread position: 16-475
Cow position: chr19:4780235-4779771 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 303
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 13

Conread position: 16-531
Cow position: chr19:1584275-1583735 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 344
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 38

Conread position: 16-565
Cow position: chr19:206517-205957 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 352
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr19:4387615-4387062 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr19:39183526-39184091 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-566
Cow position: chr19:1660686-1660120 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 372
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 128, 24

Conread position: 16-566
Cow position: chr19:7344085-7343519 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-601
Cow position: chr19:33875429-33874830 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 18-525
Cow position: chr19:48859747-48860270 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 334
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 133, 22

Conread position: 18-565
Cow position: chr19:891623-892185 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 368
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 25

Conread position: 18-565
Cow position: chr19:33943583-33943021 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 375
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 36

Conread position: 18-565
Cow position: chr19:39392526-39391969 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 372
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 36

Conread position: 22-474
Cow position: chr19:40470690-40471152 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 293
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 21

Conread position: 48-409
Cow position: chr19:44032451-44032085 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 15

Conread position: 55-371
Cow position: chr19:43146638-43146312 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 52

Conread position: 55-627
Cow position: chr19:12775086-12774495 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 349
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 83

Conread position: 58-582
Cow position: chr19:1587259-1587813 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 352
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 79, 359

Conread position: 58-586
Cow position: chr19:375745-376282 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 346
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 85, 79

Conread position: 60-565
Cow position: chr19:28579690-28580222 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 347
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 76

Conread position: 63-576
Cow position: chr19:32139427-32139945 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 342
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 120, 23

Conread position: 68-565
Cow position: chr19:40850500-40851009 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 329
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 69

Conread position: 68-582
Cow position: chr19:789357-788833 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 30

Conread position: 88-611
Cow position: chr19:42347846-42347337 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 332
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 213, 51

Conread position: 148-507
Cow position: chr19:35106911-35107282 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 12, 6

Conread position: 149-349
Cow position: chr19:14159287-14159487 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 79

Conread position: 155-370
Cow position: chr19:36148298-36148078 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 137

Conread position: 179-539
Cow position: chr19:52843384-52843026 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 193, 53

Conread position: 180-561
Cow position: chr19:5561018-5561391 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 250
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 173, 41

Conread position: 228-550
Cow position: chr19:16128949-16128623 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 129, 6

Conread position: 229-563
Cow position: chr19:10508700-10509039 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 195

Conread position: 237-533
Cow position: chr19:4301839-4301550 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 60

Conread position: 237-585
Cow position: chr19:12700581-12700229 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 119, 168

Conread position: 241-566
Cow position: chr19:40794461-40794795 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 49, 160

Conread position: 242-561
Cow position: chr19:10366810-10366497 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 114, 215

Conread position: 256-582
Cow position: chr19:437670-438006 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 102, 158

Conread position: 264-564
Cow position: chr19:257014-256715 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 195
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 286-586
Cow position: chr19:14250077-14249768 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 99

Conread position: 368-596
Cow position: chr19:40815866-40816092 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 122, 28

Conread position: 537-759
Cow position: chr19:53189620-53189843 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 36

Conread position: 545-816
Cow position: chr19:41024438-41024179 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 148, 35

Conread position: 554-812
Cow position: chr19:39576362-39576609 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 555-806
Cow position: chr19:27965932-27966181 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 67

Conread position: 555-811
Cow position: chr19:24759674-24759922 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 67

Conread position: 556-802
Cow position: chr19:34654397-34654641 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 63

Conread position: 556-806
Cow position: chr19:11559827-11560076 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 162, 24

Conread position: 556-816
Cow position: chr19:34757779-34758047 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 67

Conread position: 557-805
Cow position: chr19:33903220-33903457 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 558-797
Cow position: chr19:44572295-44572057 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 22

Conread position: 558-800
Cow position: chr19:7147851-7148092 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 24

Conread position: 559-813
Cow position: chr19:23378886-23378634 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 26, 63

Conread position: 560-813
Cow position: chr19:26269020-26269270 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 11

Conread position: 560-816
Cow position: chr19:23756544-23756787 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 562-806
Cow position: chr19:34420611-34420380 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 563-811
Cow position: chr19:38732346-38732099 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 62

Conread position: 568-800
Cow position: chr19:40126965-40127195 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 18, 54

Conread position: 571-811
Cow position: chr19:28810120-28810357 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 154, 50

Conread position: 571-812
Cow position: chr19:3621626-3621389 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 51

Conread position: 573-804
Cow position: chr19:47184886-47185114 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 38

Conread position: 573-806
Cow position: chr19:10238929-10238702 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 573-812
Cow position: chr19:49221428-49221662 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 574-804
Cow position: chr19:41497447-41497677 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 49

Conread position: 574-815
Cow position: chr19:12052654-12052889 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 574-815
Cow position: chr19:12067937-12067702 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 574-816
Cow position: chr19:23088174-23087940 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 574-816
Cow position: chr19:33575712-33575478 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 188, 47

Conread position: 575-815
Cow position: chr19:22043164-22043396 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 47

Conread position: 582-816
Cow position: chr19:10213853-10213627 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 586-784
Cow position: chr19:19916242-19916433 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 589-811
Cow position: chr19:23394963-23394747 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 590-779
Cow position: chr19:39981916-39981729 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 31

Conread position: 590-789
Cow position: chr19:52728788-52728594 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 24

Conread position: 590-812
Cow position: chr19:18504989-18505210 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 31

Conread position: 590-813
Cow position: chr19:12115144-12114922 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 31

Conread position: 590-814
Cow position: chr19:16096376-16096595 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 590-816
Cow position: chr19:10538381-10538595 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 31

Conread position: 590-816
Cow position: chr19:23889309-23889532 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 590-816
Cow position: chr19:48960570-48960353 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 591-762
Cow position: chr19:36978447-36978276 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 30

Conread position: 591-816
Cow position: chr19:42517078-42517300 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 595-806
Cow position: chr19:33913702-33913492 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 599-814
Cow position: chr19:39057416-39057199 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 23

Conread position: 619-804
Cow position: chr19:23832439-23832628 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 92

Conread position: 654-816
Cow position: chr19:9541786-9541943 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.