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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8037D06.5
        

               
Conread position:
               
6-407
               

               
Cow position:
               
chr2:2458320-2457923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
221, 57
               

               
Conread position:
               
6-559
               

               
Cow position:
               
chr2:41688243-41687667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
6-565
               

               
Cow position:
               
chr2:81258649-81258072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
6-566
               

               
Cow position:
               
chr2:32433858-32434429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr2:15445725-15446264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
6-585
               

               
Cow position:
               
chr2:575056-574464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
10-315
               

               
Cow position:
               
chr2:11682613-11682302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
10-370
               

               
Cow position:
               
chr2:41047561-41047932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-370
               

               
Cow position:
               
chr2:44092826-44092468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-539
               

               
Cow position:
               
chr2:50981681-50982222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr2:363598-364175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 404
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr2:10610174-10610753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 129
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr2:26904306-26904864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-585
               

               
Cow position:
               
chr2:281218-281810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-586
               

               
Cow position:
               
chr2:64767738-64768320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
127, 53
               

               
Conread position:
               
10-590
               

               
Cow position:
               
chr2:4401683-4402281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
11-473
               

               
Cow position:
               
chr2:11559315-11558831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr2:10467045-10466750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-370
               

               
Cow position:
               
chr2:210596-210945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-370
               

               
Cow position:
               
chr2:5868670-5869036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
16-370
               

               
Cow position:
               
chr2:41181561-41181210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-371
               

               
Cow position:
               
chr2:47600225-47600587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
16-426
               

               
Cow position:
               
chr2:48815727-48815311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
16-543
               

               
Cow position:
               
chr2:22079358-22078817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
16-561
               

               
Cow position:
               
chr2:3788434-3788982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 47
               

               
Conread position:
               
16-561
               

               
Cow position:
               
chr2:85081492-85082039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr2:8120003-8119438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr2:10184766-10185333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr2:16901718-16901150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr2:25887093-25887656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
133, 47
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr2:42669243-42669813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr2:47812311-47811743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr2:50079019-50078461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
16-566
               

               
Cow position:
               
chr2:3831769-3832321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
16-566
               

               
Cow position:
               
chr2:14824489-14823939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
16-566
               

               
Cow position:
               
chr2:52064216-52063652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-566
               

               
Cow position:
               
chr2:80291307-80291871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
16-567
               

               
Cow position:
               
chr2:9188587-9189132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-567
               

               
Cow position:
               
chr2:72689070-72688501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-582
               

               
Cow position:
               
chr2:72905764-72906352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
16-585
               

               
Cow position:
               
chr2:65936767-65937359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-623
               

               
Cow position:
               
chr2:32064589-32065199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
16-625
               

               
Cow position:
               
chr2:19012817-19012195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
17-534
               

               
Cow position:
               
chr2:63519425-63518897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
17-561
               

               
Cow position:
               
chr2:45915385-45915943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
17-566
               

               
Cow position:
               
chr2:52617935-52617368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
18-565
               

               
Cow position:
               
chr2:36981843-36981283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
42-567
               

               
Cow position:
               
chr2:24152809-24152286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
44-564
               

               
Cow position:
               
chr2:26069549-26070080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
45-464
               

               
Cow position:
               
chr2:37788590-37789020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 91
               

               
Conread position:
               
53-534
               

               
Cow position:
               
chr2:33089471-33089007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
53-585
               

               
Cow position:
               
chr2:13044282-13044838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
90, 84
               

               
Conread position:
               
54-561
               

               
Cow position:
               
chr2:72680712-72681220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
54-561
               

               
Cow position:
               
chr2:74493430-74493951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
56-565
               

               
Cow position:
               
chr2:20872089-20872592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
57-352
               

               
Cow position:
               
chr2:49302874-49303179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
57-561
               

               
Cow position:
               
chr2:35357397-35356898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 109
               

               
Conread position:
               
57-585
               

               
Cow position:
               
chr2:174145-174690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 208
               

               
Conread position:
               
57-620
               

               
Cow position:
               
chr2:25767409-25766842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
103, 161
               

               
Conread position:
               
58-367
               

               
Cow position:
               
chr2:72739161-72739468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
58-565
               

               
Cow position:
               
chr2:24471213-24471739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 170
               

               
Conread position:
               
58-565
               

               
Cow position:
               
chr2:24926836-24926311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
58-566
               

               
Cow position:
               
chr2:25027884-25028405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
58-582
               

               
Cow position:
               
chr2:6674652-6674105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 334
               

               
Conread position:
               
59-550
               

               
Cow position:
               
chr2:2086749-2087258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
63-335
               

               
Cow position:
               
chr2:63290465-63290734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
114, 75
               

               
Conread position:
               
63-563
               

               
Cow position:
               
chr2:47525953-47526468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
63-565
               

               
Cow position:
               
chr2:5902931-5903449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
93, 77
               

               
Conread position:
               
63-565
               

               
Cow position:
               
chr2:32657050-32656537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
65-566
               

               
Cow position:
               
chr2:55482767-55483257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
178, 94
               

               
Conread position:
               
68-584
               

               
Cow position:
               
chr2:34052573-34052031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
72-418
               

               
Cow position:
               
chr2:51359827-51360183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
75-565
               

               
Cow position:
               
chr2:28794648-28794135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
83-404
               

               
Cow position:
               
chr2:18664021-18663701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
86-528
               

               
Cow position:
               
chr2:39691290-39690837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
88-565
               

               
Cow position:
               
chr2:24925956-24925462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
94-567
               

               
Cow position:
               
chr2:66226356-66225896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
113-565
               

               
Cow position:
               
chr2:38014349-38013892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
179-550
               

               
Cow position:
               
chr2:36029106-36029481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 189
               

               
Conread position:
               
180-584
               

               
Cow position:
               
chr2:54694220-54693822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
176, 43
               

               
Conread position:
               
182-560
               

               
Cow position:
               
chr2:905543-905165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
229-566
               

               
Cow position:
               
chr2:3323326-3323676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 185
               

               
Conread position:
               
229-609
               

               
Cow position:
               
chr2:49628997-49628630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
233, 19
               

               
Conread position:
               
236-601
               

               
Cow position:
               
chr2:739507-739875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
239-583
               

               
Cow position:
               
chr2:15237036-15236698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 131
               

               
Conread position:
               
242-565
               

               
Cow position:
               
chr2:1867539-1867847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
242-567
               

               
Cow position:
               
chr2:44966794-44966472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
242-576
               

               
Cow position:
               
chr2:44553880-44554207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
242-584
               

               
Cow position:
               
chr2:42221027-42221371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
242-603
               

               
Cow position:
               
chr2:72187274-72187652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 228
               

               
Conread position:
               
242-607
               

               
Cow position:
               
chr2:44650473-44650100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
106, 145
               

               
Conread position:
               
247-590
               

               
Cow position:
               
chr2:47621426-47621766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 154
               

               
Conread position:
               
248-584
               

               
Cow position:
               
chr2:2394975-2394629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 49
               

               
Conread position:
               
256-585
               

               
Cow position:
               
chr2:2411575-2411910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 164
               

               
Conread position:
               
257-433
               

               
Cow position:
               
chr2:433460-433635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
261-564
               

               
Cow position:
               
chr2:54408431-54408727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
265-565
               

               
Cow position:
               
chr2:62056360-62056068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
268-584
               

               
Cow position:
               
chr2:51618463-51618133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr2:10681677-10681376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
272-559
               

               
Cow position:
               
chr2:49624734-49625021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 108
               

               
Conread position:
               
276-565
               

               
Cow position:
               
chr2:44440936-44441219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
283-612
               

               
Cow position:
               
chr2:82369878-82369561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
367-615
               

               
Cow position:
               
chr2:1692050-1691808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
181, 23
               

               
Conread position:
               
368-622
               

               
Cow position:
               
chr2:1301641-1301397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
191, 28
               

               
Conread position:
               
375-566
               

               
Cow position:
               
chr2:31663139-31662948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
184, 27
               

               
Conread position:
               
515-815
               

               
Cow position:
               
chr2:46188830-46189129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
528-812
               

               
Cow position:
               
chr2:44931008-44931289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 10
               

               
Conread position:
               
528-814
               

               
Cow position:
               
chr2:5300853-5300566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
533-812
               

               
Cow position:
               
chr2:18589291-18589560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
180, 12
               

               
Conread position:
               
536-816
               

               
Cow position:
               
chr2:44051553-44051278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
538-812
               

               
Cow position:
               
chr2:46052737-46052471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
543-809
               

               
Cow position:
               
chr2:29394770-29395036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
544-815
               

               
Cow position:
               
chr2:80275058-80275325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
546-814
               

               
Cow position:
               
chr2:41248794-41248538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
262, 36
               

               
Conread position:
               
546-816
               

               
Cow position:
               
chr2:24393460-24393721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
553-816
               

               
Cow position:
               
chr2:85794742-85794999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
554-804
               

               
Cow position:
               
chr2:58153928-58153684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
206, 67
               

               
Conread position:
               
554-816
               

               
Cow position:
               
chr2:13672737-13672492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
555-746
               

               
Cow position:
               
chr2:3773104-3773290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
555-806
               

               
Cow position:
               
chr2:43591153-43591396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
192, 17
               

               
Conread position:
               
555-812
               

               
Cow position:
               
chr2:40257191-40257441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
555-812
               

               
Cow position:
               
chr2:40484282-40484538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
555-816
               

               
Cow position:
               
chr2:33553957-33554203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
556-808
               

               
Cow position:
               
chr2:47879460-47879216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
556-812
               

               
Cow position:
               
chr2:47403438-47403173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
556-816
               

               
Cow position:
               
chr2:1923661-1923926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
556-816
               

               
Cow position:
               
chr2:46033561-46033304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
557-806
               

               
Cow position:
               
chr2:15348618-15348370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
557-812
               

               
Cow position:
               
chr2:60091214-60091463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
248, 64
               

               
Conread position:
               
557-816
               

               
Cow position:
               
chr2:62743789-62744041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
558-811
               

               
Cow position:
               
chr2:11599642-11599397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
558-812
               

               
Cow position:
               
chr2:29122106-29121854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
558-816
               

               
Cow position:
               
chr2:44007644-44007387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
559-773
               

               
Cow position:
               
chr2:37891267-37891481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
559-811
               

               
Cow position:
               
chr2:49428604-49428353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
559-816
               

               
Cow position:
               
chr2:17841771-17842021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
560-812
               

               
Cow position:
               
chr2:16839854-16839607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 29
               

               
Conread position:
               
560-812
               

               
Cow position:
               
chr2:34749774-34750013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
560-813
               

               
Cow position:
               
chr2:46164284-46164530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
563-783
               

               
Cow position:
               
chr2:6952680-6952468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
564-811
               

               
Cow position:
               
chr2:41462211-41462451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
571-812
               

               
Cow position:
               
chr2:76861244-76861485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
573-814
               

               
Cow position:
               
chr2:13002002-13001769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
573-816
               

               
Cow position:
               
chr2:74249018-74249261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
574-796
               

               
Cow position:
               
chr2:1476613-1476397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
574-811
               

               
Cow position:
               
chr2:19137687-19137918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
574-811
               

               
Cow position:
               
chr2:37619706-37619942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
574-811
               

               
Cow position:
               
chr2:41087900-41088127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
574-811
               

               
Cow position:
               
chr2:44168269-44168040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
574-813
               

               
Cow position:
               
chr2:46227671-46227432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
574-816
               

               
Cow position:
               
chr2:47753391-47753641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
575-816
               

               
Cow position:
               
chr2:19494417-19494181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
576-805
               

               
Cow position:
               
chr2:12949961-12950187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
576-806
               

               
Cow position:
               
chr2:40703467-40703689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
576-814
               

               
Cow position:
               
chr2:58074142-58074373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
576-815
               

               
Cow position:
               
chr2:18997920-18997687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
576-815
               

               
Cow position:
               
chr2:21382646-21382882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
577-810
               

               
Cow position:
               
chr2:31784131-31783903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
581-816
               

               
Cow position:
               
chr2:1422550-1422318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
582-811
               

               
Cow position:
               
chr2:39334677-39334899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
186, 39
               

               
Conread position:
               
582-814
               

               
Cow position:
               
chr2:82116283-82116059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
583-812
               

               
Cow position:
               
chr2:21410425-21410190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
583-815
               

               
Cow position:
               
chr2:50905506-50905742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
584-816
               

               
Cow position:
               
chr2:32660376-32660144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
588-812
               

               
Cow position:
               
chr2:61480781-61480559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
588-815
               

               
Cow position:
               
chr2:69350377-69350597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
590-799
               

               
Cow position:
               
chr2:51099785-51099991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
590-806
               

               
Cow position:
               
chr2:42801224-42801018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
590-806
               

               
Cow position:
               
chr2:70847074-70847285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
590-811
               

               
Cow position:
               
chr2:44170746-44170532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
590-812
               

               
Cow position:
               
chr2:20947557-20947344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
590-812
               

               
Cow position:
               
chr2:30351515-30351737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
590-812
               

               
Cow position:
               
chr2:80961773-80962001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
96, 31
               

               
Conread position:
               
590-813
               

               
Cow position:
               
chr2:46351594-46351812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
590-813
               

               
Cow position:
               
chr2:71437188-71437406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
590-816
               

               
Cow position:
               
chr2:38640507-38640291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
590-816
               

               
Cow position:
               
chr2:45597167-45596950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
591-815
               

               
Cow position:
               
chr2:84480312-84480533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
591-816
               

               
Cow position:
               
chr2:39750304-39750081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
220, 30
               

               
Conread position:
               
591-816
               

               
Cow position:
               
chr2:59819624-59819840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
592-813
               

               
Cow position:
               
chr2:77157160-77157375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
611-816
               

               
Cow position:
               
chr2:62200927-62200723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
618-803
               

               
Cow position:
               
chr2:5604685-5604505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
618-805
               

               
Cow position:
               
chr2:53650180-53650002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
618-806
               

               
Cow position:
               
chr2:46968031-46968212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
618-812
               

               
Cow position:
               
chr2:1762953-1762766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
618-816
               

               
Cow position:
               
chr2:43790262-43790067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
650-814
               

               
Cow position:
               
chr2:44222957-44222795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
658-816
               

               
Cow position:
               
chr2:40466758-40466602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               
Show alignments to all cow chromosomes.