Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037D06.5
        

               Conread position:
               6-327
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               177, 21
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               374
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               10-520
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               358
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-565
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-585
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               385
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               16-370
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               133, 47
               

               Conread position:
               16-544
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               355
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 126
               

               Conread position:
               16-561
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               366
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               16-561
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               360
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               16-563
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               367
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               388
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               373
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               374
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               365
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               372
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               16-601
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               385
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               204, 20
               

               Conread position:
               17-565
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               372
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               17-582
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               376
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               18-564
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               372
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               55-565
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               55-592
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               349
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               56-567
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               350
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               65, 75
               

               Conread position:
               57-476
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 78
               

               Conread position:
               57-568
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               333
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               58-584
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 358
               

               Conread position:
               60-568
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               338
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               62-373
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               63-370
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               80, 73
               

               Conread position:
               63-567
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 13
               

               Conread position:
               75-561
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               331
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               108, 28
               

               Conread position:
               81-563
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               321
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               62, 56
               

               Conread position:
               106-565
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 319
               

               Conread position:
               256-565
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               102, 212
               

               Conread position:
               269-609
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               82, 186
               

               Conread position:
               273-609
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 61
               

               Conread position:
               323-582
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               139, 40
               

               Conread position:
               373-568
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               158, 96
               

               Conread position:
               412-582
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               509-815
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               531-816
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               541-804
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               164, 41
               

               Conread position:
               542-750
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               553-806
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               553-816
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               556-811
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               33, 69
               

               Conread position:
               556-815
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               558-816
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               559-816
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               560-774
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               560-814
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               573-757
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               573-806
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 50
               

               Conread position:
               573-815
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               574-812
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               575-806
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               576-816
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               577-814
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               8, 45
               

               Conread position:
               579-789
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               585-804
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               589-816
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 32
               

               Conread position:
               590-812
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               590-814
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 31
               

               Conread position:
               590-816
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               590-816
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               210, 59
               

               Conread position:
               592-814
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               599-816
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               617-814
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               618-816
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               168, 42
               

               Conread position:
               620-815
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               
Show alignments to all cow chromosomes.