Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037D06.5
        

               Conread position:
               6-622
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               415
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               10-523
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-564
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               373
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               126, 29
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-567
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 54
               

               Conread position:
               16-320
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-367
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               60, 47
               

               Conread position:
               16-370
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               357
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-556
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               369
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               367
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               367
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               360
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               16-578
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               370
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               122, 54
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               365
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 137
               

               Conread position:
               17-473
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 46
               

               Conread position:
               17-564
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               381
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               17-567
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               132, 46
               

               Conread position:
               18-526
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               330
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               89, 45
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               18-566
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               50-504
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               50-565
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               344
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               106, 22
               

               Conread position:
               55-591
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               349
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               94, 22
               

               Conread position:
               56-627
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               386
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               100, 61
               

               Conread position:
               57-566
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               336
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               58-563
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               334
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               100, 46
               

               Conread position:
               58-585
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               351
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               91, 23
               

               Conread position:
               62-565
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               338
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               96, 264
               

               Conread position:
               63-331
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               63-542
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               305
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               63-561
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               328
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               36, 77
               

               Conread position:
               63-565
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 417
               

               Conread position:
               63-566
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 74
               

               Conread position:
               63-566
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 74
               

               Conread position:
               70-587
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               342
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 36
               

               Conread position:
               75-441
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               75-464
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               75-548
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               77-566
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 60
               

               Conread position:
               81-541
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               56, 153
               

               Conread position:
               123-371
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 156
               

               Conread position:
               179-612
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               167, 46
               

               Conread position:
               180-557
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               180-565
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               182-567
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               33, 230
               

               Conread position:
               228-549
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               132, 20
               

               Conread position:
               229-566
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               128, 185
               

               Conread position:
               229-620
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 40
               

               Conread position:
               231-602
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               98, 125
               

               Conread position:
               234-569
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               236-609
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               113, 12
               

               Conread position:
               239-567
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               32, 137
               

               Conread position:
               249-606
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 349
               

               Conread position:
               253-593
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               101, 73
               

               Conread position:
               256-564
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               102, 121
               

               Conread position:
               256-565
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               102, 210
               

               Conread position:
               256-567
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               102, 152
               

               Conread position:
               265-565
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 141
               

               Conread position:
               321-566
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               504-814
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               521-805
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               521-806
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               535-816
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               5, 19
               

               Conread position:
               536-810
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               546-806
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               546-811
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               546-812
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               216, 75
               

               Conread position:
               546-815
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               259, 24
               

               Conread position:
               548-773
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 47
               

               Conread position:
               556-816
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               24, 69
               

               Conread position:
               557-815
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               559-816
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               563-810
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               139, 17
               

               Conread position:
               563-810
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               566-816
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 47
               

               Conread position:
               574-773
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               574-793
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               574-814
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               236, 47
               

               Conread position:
               575-812
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               575-813
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               575-816
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               576-813
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               35, 42
               

               Conread position:
               576-813
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               576-815
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               100, 12
               

               Conread position:
               577-816
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               579-806
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               582-816
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               586-815
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               590-812
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               590-815
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               591-816
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               592-807
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               160, 29
               

               Conread position:
               618-815
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               627-816
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 46
               

               Conread position:
               649-816
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               651-812
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 0
               
Show alignments to all cow chromosomes.