Cow genome map

Conread name: Ss1.1-Pig4-TMW8037D06.5

Conread position: 6-361
Cow position:
Alignm length: 370
Alignm identity: 253
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 58

Conread position: 6-539
Cow position:
Alignm length: 549
Alignm identity: 352
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 38

Conread position: 10-317
Cow position:
Alignm length: 322
Alignm identity: 214
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 7, 34

Conread position: 10-455
Cow position:
Alignm length: 455
Alignm identity: 292
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 146, 31

Conread position: 10-551
Cow position:
Alignm length: 554
Alignm identity: 352
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 165, 29

Conread position: 10-556
Cow position:
Alignm length: 575
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-565
Cow position:
Alignm length: 583
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position:
Alignm length: 582
Alignm identity: 374
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position:
Alignm length: 590
Alignm identity: 383
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position:
Alignm length: 584
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position:
Alignm length: 576
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 11-623
Cow position:
Alignm length: 635
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 20

Conread position: 13-582
Cow position:
Alignm length: 576
Alignm identity: 369
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 130, 42

Conread position: 16-370
Cow position:
Alignm length: 364
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 38

Conread position: 16-564
Cow position:
Alignm length: 578
Alignm identity: 371
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 105, 47

Conread position: 16-564
Cow position:
Alignm length: 575
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 16-564
Cow position:
Alignm length: 579
Alignm identity: 368
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 139, 23

Conread position: 16-565
Cow position:
Alignm length: 580
Alignm identity: 371
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 575
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 47

Conread position: 16-565
Cow position:
Alignm length: 577
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 575
Alignm identity: 370
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 574
Alignm identity: 371
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 572
Alignm identity: 370
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 577
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 16-565
Cow position:
Alignm length: 580
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 28

Conread position: 16-565
Cow position:
Alignm length: 571
Alignm identity: 361
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 121, 47

Conread position: 16-565
Cow position:
Alignm length: 585
Alignm identity: 381
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 126

Conread position: 16-565
Cow position:
Alignm length: 579
Alignm identity: 378
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-566
Cow position:
Alignm length: 577
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-566
Cow position:
Alignm length: 577
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-585
Cow position:
Alignm length: 588
Alignm identity: 372
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 140, 23

Conread position: 16-620
Cow position:
Alignm length: 627
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 17-404
Cow position:
Alignm length: 402
Alignm identity: 259
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 26

Conread position: 17-565
Cow position:
Alignm length: 559
Alignm identity: 348
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 104

Conread position: 18-556
Cow position:
Alignm length: 556
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 25

Conread position: 19-368
Cow position:
Alignm length: 359
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 128, 44

Conread position: 43-602
Cow position:
Alignm length: 580
Alignm identity: 366
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 65

Conread position: 48-591
Cow position:
Alignm length: 577
Alignm identity: 364
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 67

Conread position: 56-518
Cow position:
Alignm length: 487
Alignm identity: 313
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 52

Conread position: 56-533
Cow position:
Alignm length: 495
Alignm identity: 301
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 81

Conread position: 57-556
Cow position:
Alignm length: 520
Alignm identity: 323
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 80

Conread position: 57-563
Cow position:
Alignm length: 531
Alignm identity: 336
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 97, 361

Conread position: 57-582
Cow position:
Alignm length: 552
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 51

Conread position: 58-349
Cow position:
Alignm length: 301
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 277

Conread position: 58-447
Cow position:
Alignm length: 407
Alignm identity: 264
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 23

Conread position: 58-585
Cow position:
Alignm length: 556
Alignm identity: 361
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 79

Conread position: 58-592
Cow position:
Alignm length: 566
Alignm identity: 359
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 47

Conread position: 58-601
Cow position:
Alignm length: 568
Alignm identity: 363
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 8, 35

Conread position: 58-643
Cow position:
Alignm length: 615
Alignm identity: 394
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 12, 58

Conread position: 59-580
Cow position:
Alignm length: 548
Alignm identity: 350
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 10

Conread position: 64-601
Cow position:
Alignm length: 561
Alignm identity: 352
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 92, 43

Conread position: 75-336
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 13

Conread position: 77-550
Cow position:
Alignm length: 498
Alignm identity: 323
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 128

Conread position: 83-564
Cow position:
Alignm length: 505
Alignm identity: 330
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 75, 85

Conread position: 88-370
Cow position:
Alignm length: 291
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 49

Conread position: 150-564
Cow position:
Alignm length: 432
Alignm identity: 279
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 33, 260

Conread position: 179-370
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 177, 97

Conread position: 180-521
Cow position:
Alignm length: 356
Alignm identity: 240
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 68, 44

Conread position: 180-565
Cow position:
Alignm length: 404
Alignm identity: 270
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 31

Conread position: 180-565
Cow position:
Alignm length: 399
Alignm identity: 262
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 175, 44

Conread position: 180-591
Cow position:
Alignm length: 422
Alignm identity: 279
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 152, 48

Conread position: 186-565
Cow position:
Alignm length: 391
Alignm identity: 253
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 183, 38

Conread position: 228-550
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 105, 22

Conread position: 229-543
Cow position:
Alignm length: 326
Alignm identity: 227
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 127, 5

Conread position: 229-583
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 128, 33

Conread position: 229-590
Cow position:
Alignm length: 369
Alignm identity: 237
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 5

Conread position: 236-467
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 236-496
Cow position:
Alignm length: 274
Alignm identity: 188
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 240-567
Cow position:
Alignm length: 333
Alignm identity: 218
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 158

Conread position: 265-567
Cow position:
Alignm length: 319
Alignm identity: 215
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 143

Conread position: 283-563
Cow position:
Alignm length: 291
Alignm identity: 197
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 126

Conread position: 284-577
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 154

Conread position: 339-565
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 67

Conread position: 369-563
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 33

Conread position: 529-813
Cow position:
Alignm length: 286
Alignm identity: 183
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 253, 25

Conread position: 530-812
Cow position:
Alignm length: 286
Alignm identity: 187
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 116, 12

Conread position: 537-814
Cow position:
Alignm length: 283
Alignm identity: 183
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 32

Conread position: 542-806
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 13

Conread position: 543-815
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 79

Conread position: 547-806
Cow position:
Alignm length: 260
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 553-806
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 553-816
Cow position:
Alignm length: 264
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 556-784
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 65

Conread position: 556-805
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 556-812
Cow position:
Alignm length: 261
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 69

Conread position: 556-816
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 69

Conread position: 558-813
Cow position:
Alignm length: 261
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 22

Conread position: 560-796
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 560-814
Cow position:
Alignm length: 255
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 562-815
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 563-800
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 563-813
Cow position:
Alignm length: 251
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 564-816
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 25

Conread position: 570-812
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 571-812
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 53

Conread position: 573-814
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 131, 48

Conread position: 573-814
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 574-794
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 207, 43

Conread position: 574-812
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 47

Conread position: 574-812
Cow position:
Alignm length: 239
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 231, 0

Conread position: 574-816
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 26, 17

Conread position: 574-816
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 574-816
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 575-816
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 75

Conread position: 575-816
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 575-816
Cow position:
Alignm length: 244
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 14

Conread position: 576-794
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 46

Conread position: 576-805
Cow position:
Alignm length: 231
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 46

Conread position: 576-812
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 159, 45

Conread position: 577-759
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 577-813
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 49

Conread position: 577-816
Cow position:
Alignm length: 244
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 45

Conread position: 578-813
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 38

Conread position: 582-812
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 179, 39

Conread position: 583-812
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 9

Conread position: 590-811
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 31

Conread position: 590-812
Cow position:
Alignm length: 223
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 590-815
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 31

Conread position: 591-812
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 128, 30

Conread position: 592-811
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 64, 29

Conread position: 592-812
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 592-816
Cow position:
Alignm length: 225
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 595-801
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 26

Conread position: 595-806
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 595-813
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 117

Conread position: 620-804
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 628-805
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 33

Conread position: 651-812
Cow position:
Alignm length: 162
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 651-816
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 653-809
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.