Cow genome map
Conread name: | Ss1.1-Pig4-TMW8037D06.5 |
Conread position: | 6-333 |
Cow position: | chr24:6249865-6250194 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 224 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 130, 57 |
Conread position: | 6-567 |
Cow position: | chr24:4413543-4414106 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 366 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 11, 38 |
Conread position: | 10-566 |
Cow position: | chr24:7063550-7062979 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 30 |
Conread position: | 13-567 |
Cow position: | chr24:6344923-6344376 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 357 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 173, 50 |
Conread position: | 13-601 |
Cow position: | chr24:22973073-22972464 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 396 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 23, 30 |
Conread position: | 16-317 |
Cow position: | chr24:11151123-11151429 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 208 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 20, 27 |
Conread position: | 16-467 |
Cow position: | chr24:40469371-40469821 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 296 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 167, 47 |
Conread position: | 16-524 |
Cow position: | chr24:36557564-36558073 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 319 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 144, 65 |
Conread position: | 16-565 |
Cow position: | chr24:146604-147174 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 20 |
Conread position: | 16-565 |
Cow position: | chr24:19835406-19834842 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 370 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 20, 27 |
Conread position: | 16-566 |
Cow position: | chr24:13190170-13189616 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 361 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 20, 27 |
Conread position: | 16-566 |
Cow position: | chr24:13234253-13233695 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 16-567 |
Cow position: | chr24:39491636-39492203 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 380 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 27, 23 |
Conread position: | 16-576 |
Cow position: | chr24:12088206-12087626 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 373 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 133, 54 |
Conread position: | 16-585 |
Cow position: | chr24:29189294-29188713 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 385 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 54, 23 |
Conread position: | 16-620 |
Cow position: | chr24:14870320-14870949 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 390 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 20, 38 |
Conread position: | 17-565 |
Cow position: | chr24:6338387-6337827 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 26 |
Conread position: | 18-565 |
Cow position: | chr24:16560307-16560876 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 370 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 37, 21 |
Conread position: | 19-565 |
Cow position: | chr24:5776405-5776962 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 26 |
Conread position: | 50-585 |
Cow position: | chr24:7089029-7089575 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 341 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 16, 24 |
Conread position: | 55-603 |
Cow position: | chr24:6130769-6130211 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 132 |
Conread position: | 56-370 |
Cow position: | chr24:1493517-1493203 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 223 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 13, 33 |
Conread position: | 57-564 |
Cow position: | chr24:33935354-33934827 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 341 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 86, 80 |
Conread position: | 58-565 |
Cow position: | chr24:12333772-12334292 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 335 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 11, 204 |
Conread position: | 60-581 |
Cow position: | chr24:6354098-6353552 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 352 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 72, 304 |
Conread position: | 60-582 |
Cow position: | chr24:6667800-6668322 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 339 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 83, 76 |
Conread position: | 63-367 |
Cow position: | chr24:25438561-25438246 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 210 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 74, 18 |
Conread position: | 63-565 |
Cow position: | chr24:13179064-13179581 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 329 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 39, 25 |
Conread position: | 75-566 |
Cow position: | chr24:19703435-19702931 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 325 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 81, 318 |
Conread position: | 83-600 |
Cow position: | chr24:4044328-4044854 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 347 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 51, 30 |
Conread position: | 88-568 |
Cow position: | chr24:24074350-24074811 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 315 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 55, 43 |
Conread position: | 89-563 |
Cow position: | chr24:17370102-17370558 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 298 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 35, 101 |
Conread position: | 114-600 |
Cow position: | chr24:35868680-35869170 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 309 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 127-563 |
Cow position: | chr24:37199021-37199464 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 295 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 12, 293 |
Conread position: | 180-425 |
Cow position: | chr24:6272764-6273005 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 170 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 176, 45 |
Conread position: | 180-567 |
Cow position: | chr24:5887425-5887820 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 256 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 35, 48 |
Conread position: | 228-561 |
Cow position: | chr24:8754098-8753768 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 240 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 15, 11 |
Conread position: | 229-355 |
Cow position: | chr24:1098719-1098593 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 98 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 229-474 |
Cow position: | chr24:6658711-6658957 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 160 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 129, 154 |
Conread position: | 229-550 |
Cow position: | chr24:42583987-42584311 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 213 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 127, 88 |
Conread position: | 229-564 |
Cow position: | chr24:12204561-12204902 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 225 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 129, 5 |
Conread position: | 229-566 |
Cow position: | chr24:44019292-44018945 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 238 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 128, 185 |
Conread position: | 229-582 |
Cow position: | chr24:6323566-6323934 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 247 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 9, 273 |
Conread position: | 231-566 |
Cow position: | chr24:310649-310304 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 238 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 126, 183 |
Conread position: | 236-561 |
Cow position: | chr24:29352081-29352406 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 231 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 120, 39 |
Conread position: | 248-564 |
Cow position: | chr24:12239049-12238722 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 210 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 248-569 |
Cow position: | chr24:38639283-38638961 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 223 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 108, 154 |
Conread position: | 256-559 |
Cow position: | chr24:6036745-6036433 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 205 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 100, 150 |
Conread position: | 377-601 |
Cow position: | chr24:25437902-25437689 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 153 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 502-806 |
Cow position: | chr24:27725755-27726060 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 195 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 43, 24 |
Conread position: | 520-811 |
Cow position: | chr24:17104340-17104624 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 191 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 24, 52 |
Conread position: | 523-809 |
Cow position: | chr24:13948354-13948072 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 194 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 11, 31 |
Conread position: | 537-813 |
Cow position: | chr24:37823742-37823473 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 190 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 55, 88 |
Conread position: | 543-816 |
Cow position: | chr24:39523238-39523505 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 181 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 31, 75 |
Conread position: | 549-789 |
Cow position: | chr24:36286772-36286538 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 159 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 549-804 |
Cow position: | chr24:30236072-30235827 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 178 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 553-810 |
Cow position: | chr24:29984792-29985037 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 172 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 249, 27 |
Conread position: | 556-812 |
Cow position: | chr24:28303163-28303419 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 172 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 29, 66 |
Conread position: | 559-806 |
Cow position: | chr24:28510982-28510749 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 173 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 559-816 |
Cow position: | chr24:1269978-1269728 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 181 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 18, 68 |
Conread position: | 560-786 |
Cow position: | chr24:3412873-3412655 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 159 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 46, 26 |
Conread position: | 560-811 |
Cow position: | chr24:22133355-22133118 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 174 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 40, 11 |
Conread position: | 560-814 |
Cow position: | chr24:11887344-11887105 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 172 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 564-814 |
Cow position: | chr24:230471-230224 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 175 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 21, 58 |
Conread position: | 565-816 |
Cow position: | chr24:27844344-27844586 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 171 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 20, 9 |
Conread position: | 566-803 |
Cow position: | chr24:21834775-21835004 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 160 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 574-808 |
Cow position: | chr24:5632848-5633081 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 158 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 75, 47 |
Conread position: | 574-815 |
Cow position: | chr24:27285004-27284764 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 168 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 81, 47 |
Conread position: | 574-816 |
Cow position: | chr24:28234220-28233987 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 165 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 575-816 |
Cow position: | chr24:2402198-2402425 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 166 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 575-816 |
Cow position: | chr24:37974804-37975040 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 165 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 237, 72 |
Conread position: | 590-797 |
Cow position: | chr24:25122501-25122306 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 146 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 590-811 |
Cow position: | chr24:5360875-5360666 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 154 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 590-814 |
Cow position: | chr24:35675695-35675483 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 155 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 595-806 |
Cow position: | chr24:15288986-15288779 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 143 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 595-806 |
Cow position: | chr24:28496423-28496630 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 144 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 618-812 |
Cow position: | chr24:18356916-18357106 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 134 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 618-814 |
Cow position: | chr24:17311087-17311273 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 649-816 |
Cow position: | chr24:39791647-39791483 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 120 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 653-816 |
Cow position: | chr24:28043080-28042917 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 118 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 15, 10 |
Show alignments to all cow chromosomes.