Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037D06.5 |
| Conread position: | 10-549 |
| Cow position: | chr26:9113863-9113307 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 10-578 |
| Cow position: | chr26:2350213-2350804 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 378 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 16-370 |
| Cow position: | chr26:9842440-9842796 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 142, 65 |
| Conread position: | 16-582 |
| Cow position: | chr26:17394937-17395516 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 372 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-585 |
| Cow position: | chr26:14895921-14895336 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 18-564 |
| Cow position: | chr26:34013639-34013085 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 369 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 225 |
| Conread position: | 55-559 |
| Cow position: | chr26:35336252-35336768 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 333 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 81 |
| Conread position: | 57-367 |
| Cow position: | chr26:21008082-21007759 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 57-581 |
| Cow position: | chr26:21824742-21825289 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 365 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 43, 48 |
| Conread position: | 57-582 |
| Cow position: | chr26:6847519-6848050 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 80 |
| Conread position: | 57-585 |
| Cow position: | chr26:4603235-4603772 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 360 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 59-311 |
| Cow position: | chr26:616329-616583 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 63-547 |
| Cow position: | chr26:26271627-26271142 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 95, 173 |
| Conread position: | 63-565 |
| Cow position: | chr26:5677065-5676527 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 342 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 95, 354 |
| Conread position: | 64-561 |
| Cow position: | chr26:19205793-19205289 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 98, 125 |
| Conread position: | 73-566 |
| Cow position: | chr26:3028916-3029429 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 335 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 70, 15 |
| Conread position: | 75-549 |
| Cow position: | chr26:21708491-21708974 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 323 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 151, 47 |
| Conread position: | 191-623 |
| Cow position: | chr26:17325873-17325433 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 167, 223 |
| Conread position: | 229-561 |
| Cow position: | chr26:16479079-16478744 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 42 |
| Conread position: | 229-566 |
| Cow position: | chr26:28373471-28373819 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 48, 186 |
| Conread position: | 231-550 |
| Cow position: | chr26:8216535-8216848 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 125, 86 |
| Conread position: | 257-590 |
| Cow position: | chr26:8192613-8192969 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 264-555 |
| Cow position: | chr26:28229489-28229198 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 44 |
| Conread position: | 271-567 |
| Cow position: | chr26:29091057-29091358 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 99 |
| Conread position: | 275-521 |
| Cow position: | chr26:33933133-33932876 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 275-612 |
| Cow position: | chr26:35252381-35252724 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 81, 129 |
| Conread position: | 279-561 |
| Cow position: | chr26:30084189-30083892 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 224 |
| Conread position: | 279-585 |
| Cow position: | chr26:1656355-1656652 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 113 |
| Conread position: | 294-561 |
| Cow position: | chr26:12827633-12827360 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 62, 112 |
| Conread position: | 382-584 |
| Cow position: | chr26:9843103-9843306 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 396-602 |
| Cow position: | chr26:12557724-12557921 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 536-816 |
| Cow position: | chr26:33253058-33253332 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 540-812 |
| Cow position: | chr26:23671673-23671403 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 544-813 |
| Cow position: | chr26:34610936-34611195 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 546-811 |
| Cow position: | chr26:33201823-33202082 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 548-815 |
| Cow position: | chr26:3758034-3757773 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 552-812 |
| Cow position: | chr26:28251394-28251140 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 208, 34 |
| Conread position: | 554-813 |
| Cow position: | chr26:26887900-26888147 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 557-815 |
| Cow position: | chr26:6487556-6487815 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 207, 29 |
| Conread position: | 558-815 |
| Cow position: | chr26:647488-647739 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 561-815 |
| Cow position: | chr26:18872847-18872594 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 61 |
| Conread position: | 571-806 |
| Cow position: | chr26:23925066-23924843 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 574-806 |
| Cow position: | chr26:19591699-19591476 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 574-812 |
| Cow position: | chr26:12144893-12145131 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 574-814 |
| Cow position: | chr26:6714076-6714315 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 574-815 |
| Cow position: | chr26:7314848-7314606 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 574-816 |
| Cow position: | chr26:19446354-19446117 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 575-813 |
| Cow position: | chr26:4584993-4585224 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 575-816 |
| Cow position: | chr26:12940628-12940383 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 576-816 |
| Cow position: | chr26:20291473-20291709 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 578-812 |
| Cow position: | chr26:9535731-9535505 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 579-812 |
| Cow position: | chr26:11875009-11875233 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 585-816 |
| Cow position: | chr26:20770060-20769834 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 588-800 |
| Cow position: | chr26:28423492-28423286 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 588-816 |
| Cow position: | chr26:13802315-13802097 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 590-811 |
| Cow position: | chr26:7687038-7687257 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 592-806 |
| Cow position: | chr26:32897677-32897876 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 595-812 |
| Cow position: | chr26:22892248-22892458 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 618-812 |
| Cow position: | chr26:24240862-24240667 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 93 |
| Conread position: | 619-816 |
| Cow position: | chr26:8307350-8307545 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 639-804 |
| Cow position: | chr26:33242049-33241884 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 639-811 |
| Cow position: | chr26:677822-677992 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 646-806 |
| Cow position: | chr26:23582793-23582952 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.