Cow genome map

Conread name: Ss1.1-Pig4-TMW8037D06.5

Conread position: 7-566
Cow position: chr27:167002-167574 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 382
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 36

Conread position: 13-601
Cow position: chr27:28893519-28892936 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 28

Conread position: 15-566
Cow position: chr27:1676653-1677219 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 379
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 21, 28

Conread position: 16-342
Cow position: chr27:23293460-23293131 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 20, 27

Conread position: 16-472
Cow position: chr27:9386993-9386524 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 305
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 95, 47

Conread position: 16-565
Cow position: chr27:4981289-4980724 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 16-565
Cow position: chr27:9331662-9331087 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr27:12748957-12748390 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 23

Conread position: 16-576
Cow position: chr27:9991295-9991867 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 16-585
Cow position: chr27:3233605-3234192 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 382
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-598
Cow position: chr27:15635422-15636019 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 17-565
Cow position: chr27:15274155-15274714 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 369
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 120, 46

Conread position: 49-565
Cow position: chr27:26326949-26326414 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 14

Conread position: 49-567
Cow position: chr27:22673917-22673405 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 339
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 20

Conread position: 77-522
Cow position: chr27:25034564-25035016 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 296
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 83, 124

Conread position: 78-565
Cow position: chr27:13899168-13898668 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 322
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 105, 80

Conread position: 82-565
Cow position: chr27:19525403-19524907 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 327
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 61, 55

Conread position: 83-584
Cow position: chr27:26553588-26554095 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 55

Conread position: 108-584
Cow position: chr27:7936336-7935839 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 318
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 118

Conread position: 148-563
Cow position: chr27:22150720-22150298 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 276
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 61, 41

Conread position: 179-557
Cow position: chr27:29856444-29856064 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 46

Conread position: 229-550
Cow position: chr27:6160170-6160502 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 211
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 229-556
Cow position: chr27:29056859-29056522 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 82, 78

Conread position: 235-585
Cow position: chr27:21285858-21286213 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 232
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 73, 236

Conread position: 245-571
Cow position: chr27:16966853-16967178 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 110, 29

Conread position: 265-596
Cow position: chr27:16470612-16470266 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 68, 105

Conread position: 531-806
Cow position: chr27:10404399-10404136 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 11

Conread position: 537-815
Cow position: chr27:19387735-19388008 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 77

Conread position: 537-816
Cow position: chr27:26434096-26433816 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 17

Conread position: 542-801
Cow position: chr27:22035652-22035402 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 82

Conread position: 542-816
Cow position: chr27:23560309-23560042 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 50

Conread position: 554-806
Cow position: chr27:426701-426949 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 9

Conread position: 555-815
Cow position: chr27:21669378-21669128 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 33

Conread position: 558-816
Cow position: chr27:17397711-17397464 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 560-810
Cow position: chr27:7343685-7343444 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 154, 19

Conread position: 563-812
Cow position: chr27:6106450-6106684 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 563-816
Cow position: chr27:31210292-31210536 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 568-815
Cow position: chr27:19685965-19685724 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 52

Conread position: 573-804
Cow position: chr27:22220303-22220532 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 13

Conread position: 574-757
Cow position: chr27:18688660-18688478 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 114, 47

Conread position: 575-815
Cow position: chr27:23594071-23594312 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 47

Conread position: 576-816
Cow position: chr27:15453966-15454198 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 36

Conread position: 577-811
Cow position: chr27:15669019-15668786 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 45

Conread position: 584-806
Cow position: chr27:23890695-23890918 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 37

Conread position: 590-810
Cow position: chr27:15003211-15002994 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 590-812
Cow position: chr27:19508780-19508999 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 590-816
Cow position: chr27:7412162-7412383 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 590-816
Cow position: chr27:27740525-27740303 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 31

Conread position: 591-773
Cow position: chr27:15859528-15859350 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 592-816
Cow position: chr27:12425058-12425279 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 97, 29

Conread position: 596-815
Cow position: chr27:16103585-16103796 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 596-816
Cow position: chr27:26238798-26239015 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 25

Conread position: 599-816
Cow position: chr27:14670603-14670392 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 22

Show alignments to all cow chromosomes.