Cow genome map
Conread name: | Ss1.1-Pig4-TMW8037D06.5 |
Conread position: | 7-566 |
Cow position: | chr27:167002-167574 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 382 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 29, 36 |
Conread position: | 13-601 |
Cow position: | chr27:28893519-28892936 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 28 |
Conread position: | 15-566 |
Cow position: | chr27:1676653-1677219 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 379 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 21, 28 |
Conread position: | 16-342 |
Cow position: | chr27:23293460-23293131 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 221 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 20, 27 |
Conread position: | 16-472 |
Cow position: | chr27:9386993-9386524 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 305 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 95, 47 |
Conread position: | 16-565 |
Cow position: | chr27:4981289-4980724 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 22 |
Conread position: | 16-565 |
Cow position: | chr27:9331662-9331087 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 27 |
Conread position: | 16-565 |
Cow position: | chr27:12748957-12748390 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 23 |
Conread position: | 16-576 |
Cow position: | chr27:9991295-9991867 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 38 |
Conread position: | 16-585 |
Cow position: | chr27:3233605-3234192 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 382 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 20, 27 |
Conread position: | 16-598 |
Cow position: | chr27:15635422-15636019 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 27 |
Conread position: | 17-565 |
Cow position: | chr27:15274155-15274714 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 369 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 120, 46 |
Conread position: | 49-565 |
Cow position: | chr27:26326949-26326414 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 14 |
Conread position: | 49-567 |
Cow position: | chr27:22673917-22673405 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 339 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 97, 20 |
Conread position: | 77-522 |
Cow position: | chr27:25034564-25035016 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 296 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 83, 124 |
Conread position: | 78-565 |
Cow position: | chr27:13899168-13898668 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 322 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 105, 80 |
Conread position: | 82-565 |
Cow position: | chr27:19525403-19524907 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 327 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 61, 55 |
Conread position: | 83-584 |
Cow position: | chr27:26553588-26554095 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 55 |
Conread position: | 108-584 |
Cow position: | chr27:7936336-7935839 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 318 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 30, 118 |
Conread position: | 148-563 |
Cow position: | chr27:22150720-22150298 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 276 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 61, 41 |
Conread position: | 179-557 |
Cow position: | chr27:29856444-29856064 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 261 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 139, 46 |
Conread position: | 229-550 |
Cow position: | chr27:6160170-6160502 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 211 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 229-556 |
Cow position: | chr27:29056859-29056522 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 231 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 82, 78 |
Conread position: | 235-585 |
Cow position: | chr27:21285858-21286213 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 232 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 73, 236 |
Conread position: | 245-571 |
Cow position: | chr27:16966853-16967178 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 221 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 110, 29 |
Conread position: | 265-596 |
Cow position: | chr27:16470612-16470266 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 245 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 68, 105 |
Conread position: | 531-806 |
Cow position: | chr27:10404399-10404136 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 186 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 118, 11 |
Conread position: | 537-815 |
Cow position: | chr27:19387735-19388008 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 184 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 6, 77 |
Conread position: | 537-816 |
Cow position: | chr27:26434096-26433816 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 192 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 35, 17 |
Conread position: | 542-801 |
Cow position: | chr27:22035652-22035402 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 175 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 30, 82 |
Conread position: | 542-816 |
Cow position: | chr27:23560309-23560042 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 181 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 24, 50 |
Conread position: | 554-806 |
Cow position: | chr27:426701-426949 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 183 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 32, 9 |
Conread position: | 555-815 |
Cow position: | chr27:21669378-21669128 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 181 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 74, 33 |
Conread position: | 558-816 |
Cow position: | chr27:17397711-17397464 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 179 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 560-810 |
Cow position: | chr27:7343685-7343444 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 175 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 154, 19 |
Conread position: | 563-812 |
Cow position: | chr27:6106450-6106684 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 171 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 563-816 |
Cow position: | chr27:31210292-31210536 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 169 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 568-815 |
Cow position: | chr27:19685965-19685724 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 165 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 18, 52 |
Conread position: | 573-804 |
Cow position: | chr27:22220303-22220532 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 155 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 96, 13 |
Conread position: | 574-757 |
Cow position: | chr27:18688660-18688478 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 128 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 114, 47 |
Conread position: | 575-815 |
Cow position: | chr27:23594071-23594312 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 166 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 10, 47 |
Conread position: | 576-816 |
Cow position: | chr27:15453966-15454198 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 165 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 9, 36 |
Conread position: | 577-811 |
Cow position: | chr27:15669019-15668786 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 158 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 108, 45 |
Conread position: | 584-806 |
Cow position: | chr27:23890695-23890918 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 152 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 96, 37 |
Conread position: | 590-810 |
Cow position: | chr27:15003211-15002994 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 162 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 590-812 |
Cow position: | chr27:19508780-19508999 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 152 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 590-816 |
Cow position: | chr27:7412162-7412383 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 158 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 590-816 |
Cow position: | chr27:27740525-27740303 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 153 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 57, 31 |
Conread position: | 591-773 |
Cow position: | chr27:15859528-15859350 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 126 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 592-816 |
Cow position: | chr27:12425058-12425279 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 154 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 97, 29 |
Conread position: | 596-815 |
Cow position: | chr27:16103585-16103796 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 149 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 596-816 |
Cow position: | chr27:26238798-26239015 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 76, 25 |
Conread position: | 599-816 |
Cow position: | chr27:14670603-14670392 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 150 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 106, 22 |
Show alignments to all cow chromosomes.