Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037D06.5
        

               Conread position:
               7-473
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               305
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 175
               

               Conread position:
               10-455
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               306
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               10-623
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               409
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               13-414
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               16-337
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               186, 47
               

               Conread position:
               16-370
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-561
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               369
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               16-561
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               360
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               367
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               96, 20
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               364
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               376
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               378
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               133, 47
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               374
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               374
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               16-567
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               367
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               127, 23
               

               Conread position:
               16-568
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               370
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-582
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               374
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               375
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               16-585
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               16-595
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               379
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               18-568
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               374
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               18-582
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               53-474
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 185
               

               Conread position:
               55-370
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               88, 82
               

               Conread position:
               55-584
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               355
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 179
               

               Conread position:
               57-565
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 80
               

               Conread position:
               57-566
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 80
               

               Conread position:
               57-584
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 92
               

               Conread position:
               58-368
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               58-466
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               58-538
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               337
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               12, 184
               

               Conread position:
               58-561
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 82
               

               Conread position:
               63-441
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               97-543
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               107-620
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               341
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 129
               

               Conread position:
               111-581
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               38, 26
               

               Conread position:
               148-373
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               58, 95
               

               Conread position:
               179-388
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               177, 45
               

               Conread position:
               180-565
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               176, 44
               

               Conread position:
               180-585
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               181-565
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               152, 43
               

               Conread position:
               228-568
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 58
               

               Conread position:
               229-565
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               128, 27
               

               Conread position:
               229-566
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               144, 184
               

               Conread position:
               229-567
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               131, 147
               

               Conread position:
               230-355
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               234-565
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 20
               

               Conread position:
               245-586
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 143
               

               Conread position:
               247-601
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               287, 78
               

               Conread position:
               248-561
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 213
               

               Conread position:
               256-583
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               94, 149
               

               Conread position:
               258-564
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 268
               

               Conread position:
               264-561
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 141
               

               Conread position:
               265-547
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               268-565
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 134
               

               Conread position:
               289-566
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 115
               

               Conread position:
               291-557
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               321-566
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               376-566
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               383-566
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               525-808
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               544-816
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               556-812
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               556-816
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               226, 17
               

               Conread position:
               557-811
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               130, 23
               

               Conread position:
               559-812
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               559-816
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               559-816
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               561-816
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               564-812
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               218, 46
               

               Conread position:
               565-806
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               574-811
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               137, 141
               

               Conread position:
               574-816
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               575-789
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 17
               

               Conread position:
               576-805
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               576-812
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               581-813
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               582-811
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               589-812
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               116, 35
               

               Conread position:
               589-814
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               61, 8
               

               Conread position:
               590-811
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               591-816
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               596-812
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               618-805
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               618-805
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               618-811
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 0
               
Show alignments to all cow chromosomes.