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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8037D06.5
        

               
Conread position:
               
6-556
               

               
Cow position:
               
chr3:68871901-68872469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
6-566
               

               
Cow position:
               
chr3:46859439-46860014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
6-623
               

               
Cow position:
               
chr3:18861277-18860639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
8-566
               

               
Cow position:
               
chr3:5885356-5884807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
10-319
               

               
Cow position:
               
chr3:13724932-13725251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-548
               

               
Cow position:
               
chr3:16224744-16224178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-563
               

               
Cow position:
               
chr3:76380225-76380787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
146, 58
               

               
Conread position:
               
10-564
               

               
Cow position:
               
chr3:68890725-68891292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
10-565
               

               
Cow position:
               
chr3:4287936-4287366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-565
               

               
Cow position:
               
chr3:42448958-42448393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
10-565
               

               
Cow position:
               
chr3:56296037-56295464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr3:2870640-2870064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr3:19799331-19799896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr3:19880495-19879920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr3:29575269-29575848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr3:36862605-36863182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr3:40338296-40338873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr3:64026286-64026859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
10-567
               

               
Cow position:
               
chr3:34505501-34506069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
12-370
               

               
Cow position:
               
chr3:51856840-51857210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 121
               

               
Conread position:
               
13-549
               

               
Cow position:
               
chr3:6784213-6783659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr3:15053866-15054159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
16-323
               

               
Cow position:
               
chr3:71140975-71141275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-370
               

               
Cow position:
               
chr3:58167516-58167156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
16-476
               

               
Cow position:
               
chr3:23943693-23944178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
113, 52
               

               
Conread position:
               
16-557
               

               
Cow position:
               
chr3:24645056-24644509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
16-557
               

               
Cow position:
               
chr3:50917177-50916629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-562
               

               
Cow position:
               
chr3:62503952-62503403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
16-563
               

               
Cow position:
               
chr3:56147148-56146581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:5952345-5952904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:7478082-7478640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:18813344-18812775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:23206031-23206595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:30617083-30617644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:34029078-34029643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:40825234-40824669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:49135720-49136288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:49543367-49543927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-565
               

               
Cow position:
               
chr3:72631898-72631343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-576
               

               
Cow position:
               
chr3:6687640-6687055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
16-576
               

               
Cow position:
               
chr3:63240397-63240982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
16-587
               

               
Cow position:
               
chr3:2709025-2709611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-596
               

               
Cow position:
               
chr3:45976341-45975756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-612
               

               
Cow position:
               
chr3:19888820-19889405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
140, 26
               

               
Conread position:
               
16-623
               

               
Cow position:
               
chr3:57482880-57483501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
16-626
               

               
Cow position:
               
chr3:19755118-19755744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
17-447
               

               
Cow position:
               
chr3:64652449-64652004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
17-542
               

               
Cow position:
               
chr3:39879190-39879715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
138, 46
               

               
Conread position:
               
17-566
               

               
Cow position:
               
chr3:37970889-37970322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
18-370
               

               
Cow position:
               
chr3:77578307-77578655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
18-565
               

               
Cow position:
               
chr3:21180855-21181416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
18-581
               

               
Cow position:
               
chr3:79121765-79122336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
19-563
               

               
Cow position:
               
chr3:53412945-53412406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
44-370
               

               
Cow position:
               
chr3:8976519-8976191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
44-563
               

               
Cow position:
               
chr3:71145589-71146115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 222
               

               
Conread position:
               
48-403
               

               
Cow position:
               
chr3:25688055-25687694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr3:31320167-31319792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
50-566
               

               
Cow position:
               
chr3:2367544-2368061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
53-563
               

               
Cow position:
               
chr3:48057553-48058082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 84
               

               
Conread position:
               
54-582
               

               
Cow position:
               
chr3:3839708-3840254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
54-592
               

               
Cow position:
               
chr3:43414899-43414374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
55-565
               

               
Cow position:
               
chr3:5993280-5993803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
106, 351
               

               
Conread position:
               
55-596
               

               
Cow position:
               
chr3:55893184-55892637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 173
               

               
Conread position:
               
57-550
               

               
Cow position:
               
chr3:65208983-65208474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
57-563
               

               
Cow position:
               
chr3:595932-595415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
57-566
               

               
Cow position:
               
chr3:2919270-2918745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr3:49561869-49562193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
58-433
               

               
Cow position:
               
chr3:57978620-57978999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
59-564
               

               
Cow position:
               
chr3:38495043-38494519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
59-620
               

               
Cow position:
               
chr3:47088076-47087520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
114, 94
               

               
Conread position:
               
60-370
               

               
Cow position:
               
chr3:58127589-58127273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
63-304
               

               
Cow position:
               
chr3:5947838-5948082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
157, 59
               

               
Conread position:
               
63-370
               

               
Cow position:
               
chr3:78908200-78908506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
144, 79
               

               
Conread position:
               
63-370
               

               
Cow position:
               
chr3:80479956-80480259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
63-557
               

               
Cow position:
               
chr3:39660390-39660879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
115, 70
               

               
Conread position:
               
64-564
               

               
Cow position:
               
chr3:74851351-74851851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
64-582
               

               
Cow position:
               
chr3:32200814-32200275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
67-576
               

               
Cow position:
               
chr3:4667889-4667357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
75-565
               

               
Cow position:
               
chr3:78025635-78026136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
81-576
               

               
Cow position:
               
chr3:16077119-16076619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
83-557
               

               
Cow position:
               
chr3:19832140-19832633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
105-370
               

               
Cow position:
               
chr3:8438782-8438521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
180-472
               

               
Cow position:
               
chr3:45982764-45983057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
180-557
               

               
Cow position:
               
chr3:56100021-56100398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
176, 52
               

               
Conread position:
               
180-565
               

               
Cow position:
               
chr3:36876993-36877375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
178, 44
               

               
Conread position:
               
181-564
               

               
Cow position:
               
chr3:24457515-24457908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
173, 46
               

               
Conread position:
               
181-565
               

               
Cow position:
               
chr3:64015717-64016088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
222-476
               

               
Cow position:
               
chr3:12689038-12689315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
228-564
               

               
Cow position:
               
chr3:29580233-29579907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
129, 145
               

               
Conread position:
               
228-586
               

               
Cow position:
               
chr3:52653036-52653408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 192
               

               
Conread position:
               
229-525
               

               
Cow position:
               
chr3:53927544-53927842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
229-561
               

               
Cow position:
               
chr3:8240314-8239977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
229-565
               

               
Cow position:
               
chr3:2853829-2854170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
106, 48
               

               
Conread position:
               
229-565
               

               
Cow position:
               
chr3:31416639-31416296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 251
               

               
Conread position:
               
229-566
               

               
Cow position:
               
chr3:1742954-1742607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
128, 185
               

               
Conread position:
               
229-585
               

               
Cow position:
               
chr3:18462223-18462578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
229-596
               

               
Cow position:
               
chr3:60263395-60263771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
235-582
               

               
Cow position:
               
chr3:7312860-7313220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
236-448
               

               
Cow position:
               
chr3:42053063-42053276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 176
               

               
Conread position:
               
236-455
               

               
Cow position:
               
chr3:24192680-24192910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 172
               

               
Conread position:
               
242-517
               

               
Cow position:
               
chr3:70197832-70197547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
114, 210
               

               
Conread position:
               
242-567
               

               
Cow position:
               
chr3:67164888-67164554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
262-566
               

               
Cow position:
               
chr3:47079820-47080134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
85, 144
               

               
Conread position:
               
262-567
               

               
Cow position:
               
chr3:46017622-46017325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
236, 77
               

               
Conread position:
               
262-567
               

               
Cow position:
               
chr3:50049114-50048808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 216
               

               
Conread position:
               
264-590
               

               
Cow position:
               
chr3:10095982-10095662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
265-597
               

               
Cow position:
               
chr3:34089901-34090241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
269-567
               

               
Cow position:
               
chr3:16898622-16898918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
271-560
               

               
Cow position:
               
chr3:65207642-65207940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
273-568
               

               
Cow position:
               
chr3:82638668-82638365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
321-566
               

               
Cow position:
               
chr3:48843769-48843531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
365-565
               

               
Cow position:
               
chr3:38867792-38867594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
373-576
               

               
Cow position:
               
chr3:10241120-10240917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
396-810
               

               
Cow position:
               
chr3:2675396-2674977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
401-582
               

               
Cow position:
               
chr3:2509602-2509785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
145, 109
               

               
Conread position:
               
420-565
               

               
Cow position:
               
chr3:40616425-40616569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
531-812
               

               
Cow position:
               
chr3:50768899-50768625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
536-814
               

               
Cow position:
               
chr3:51033593-51033310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
544-812
               

               
Cow position:
               
chr3:47753443-47753172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
554-816
               

               
Cow position:
               
chr3:12705347-12705601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
556-806
               

               
Cow position:
               
chr3:2518343-2518587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
209, 85
               

               
Conread position:
               
556-814
               

               
Cow position:
               
chr3:59605039-59604790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
556-816
               

               
Cow position:
               
chr3:64197021-64196768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
557-816
               

               
Cow position:
               
chr3:7337591-7337841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
557-816
               

               
Cow position:
               
chr3:49363303-49363051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
557-816
               

               
Cow position:
               
chr3:72474121-72473857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
558-809
               

               
Cow position:
               
chr3:22165220-22165466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
558-815
               

               
Cow position:
               
chr3:55177560-55177803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
558-815
               

               
Cow position:
               
chr3:69785428-69785682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
558-816
               

               
Cow position:
               
chr3:3883622-3883873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
560-815
               

               
Cow position:
               
chr3:27274720-27274474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
562-804
               

               
Cow position:
               
chr3:68156919-68156676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
563-814
               

               
Cow position:
               
chr3:17456080-17456324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
571-808
               

               
Cow position:
               
chr3:45882085-45881848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
572-816
               

               
Cow position:
               
chr3:52845734-52845502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
573-810
               

               
Cow position:
               
chr3:78077370-78077133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
573-813
               

               
Cow position:
               
chr3:71231581-71231341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
573-816
               

               
Cow position:
               
chr3:3316626-3316875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
575-816
               

               
Cow position:
               
chr3:31349928-31350162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
575-816
               

               
Cow position:
               
chr3:44932692-44932458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
575-816
               

               
Cow position:
               
chr3:48072706-48072940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
577-806
               

               
Cow position:
               
chr3:48363247-48363028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
577-811
               

               
Cow position:
               
chr3:54506884-54506654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
577-812
               

               
Cow position:
               
chr3:15443549-15443782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
577-815
               

               
Cow position:
               
chr3:16752073-16752315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
578-815
               

               
Cow position:
               
chr3:52608358-52608125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
580-812
               

               
Cow position:
               
chr3:79196938-79196705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
581-816
               

               
Cow position:
               
chr3:10668706-10668937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
581-816
               

               
Cow position:
               
chr3:69416604-69416839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
582-816
               

               
Cow position:
               
chr3:54373685-54373919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
584-816
               

               
Cow position:
               
chr3:19586034-19585806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
584-816
               

               
Cow position:
               
chr3:78093223-78093448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
230, 31
               

               
Conread position:
               
590-811
               

               
Cow position:
               
chr3:11281933-11281713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
590-812
               

               
Cow position:
               
chr3:55189586-55189809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
590-814
               

               
Cow position:
               
chr3:15950753-15950970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
221, 57
               

               
Conread position:
               
590-815
               

               
Cow position:
               
chr3:29946551-29946331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
591-805
               

               
Cow position:
               
chr3:26603383-26603602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
592-806
               

               
Cow position:
               
chr3:23132006-23132217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
592-806
               

               
Cow position:
               
chr3:78092349-78092559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
595-809
               

               
Cow position:
               
chr3:53083824-53084039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
134, 26
               

               
Conread position:
               
595-812
               

               
Cow position:
               
chr3:11987487-11987274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
595-815
               

               
Cow position:
               
chr3:53222171-53221956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
166, 26
               

               
Conread position:
               
598-816
               

               
Cow position:
               
chr3:60264565-60264775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
213, 23
               

               
Conread position:
               
599-805
               

               
Cow position:
               
chr3:39969708-39969910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
145, 22
               

               
Conread position:
               
618-816
               

               
Cow position:
               
chr3:10958104-10958298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
619-805
               

               
Cow position:
               
chr3:32409356-32409165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
625-816
               

               
Cow position:
               
chr3:19626377-19626564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
637-814
               

               
Cow position:
               
chr3:73461083-73460911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
645-816
               

               
Cow position:
               
chr3:56059922-56059753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 28
               
Show alignments to all cow chromosomes.