Cow genome map

Conread name: Ss1.1-Pig4-TMW8037D06.5

Conread position: 2-416
Cow position:
Alignm length: 429
Alignm identity: 273
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 148, 61

Conread position: 10-349
Cow position:
Alignm length: 353
Alignm identity: 237
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 34

Conread position: 10-370
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 34

Conread position: 10-565
Cow position:
Alignm length: 583
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position:
Alignm length: 579
Alignm identity: 371
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 72

Conread position: 10-566
Cow position:
Alignm length: 584
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position:
Alignm length: 589
Alignm identity: 380
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position:
Alignm length: 583
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position:
Alignm length: 577
Alignm identity: 370
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 7, 54

Conread position: 10-566
Cow position:
Alignm length: 579
Alignm identity: 366
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 7, 34

Conread position: 10-580
Cow position:
Alignm length: 593
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 13

Conread position: 13-566
Cow position:
Alignm length: 574
Alignm identity: 354
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 30

Conread position: 16-369
Cow position:
Alignm length: 373
Alignm identity: 243
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 27

Conread position: 16-418
Cow position:
Alignm length: 423
Alignm identity: 281
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 144, 16

Conread position: 16-455
Cow position:
Alignm length: 453
Alignm identity: 294
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 104, 47

Conread position: 16-507
Cow position:
Alignm length: 515
Alignm identity: 337
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-550
Cow position:
Alignm length: 551
Alignm identity: 344
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 36

Conread position: 16-556
Cow position:
Alignm length: 567
Alignm identity: 366
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-563
Cow position:
Alignm length: 578
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 562
Alignm identity: 348
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 167, 47

Conread position: 16-565
Cow position:
Alignm length: 568
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 577
Alignm identity: 372
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 574
Alignm identity: 367
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 581
Alignm identity: 373
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 35, 23

Conread position: 16-566
Cow position:
Alignm length: 577
Alignm identity: 372
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 20, 38

Conread position: 16-566
Cow position:
Alignm length: 568
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 56

Conread position: 16-567
Cow position:
Alignm length: 579
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 16

Conread position: 16-585
Cow position:
Alignm length: 594
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-586
Cow position:
Alignm length: 597
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 16-588
Cow position:
Alignm length: 606
Alignm identity: 393
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 20, 27

Conread position: 16-605
Cow position:
Alignm length: 615
Alignm identity: 393
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 27

Conread position: 17-566
Cow position:
Alignm length: 576
Alignm identity: 377
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 15

Conread position: 18-565
Cow position:
Alignm length: 573
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 25

Conread position: 18-566
Cow position:
Alignm length: 574
Alignm identity: 372
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 45

Conread position: 18-582
Cow position:
Alignm length: 585
Alignm identity: 372
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 18, 25

Conread position: 18-620
Cow position:
Alignm length: 622
Alignm identity: 399
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 25

Conread position: 18-620
Cow position:
Alignm length: 628
Alignm identity: 398
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 18, 25

Conread position: 19-475
Cow position:
Alignm length: 480
Alignm identity: 310
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 64

Conread position: 21-566
Cow position:
Alignm length: 565
Alignm identity: 356
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 140, 52

Conread position: 33-547
Cow position:
Alignm length: 533
Alignm identity: 346
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 147, 30

Conread position: 45-578
Cow position:
Alignm length: 551
Alignm identity: 343
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 28

Conread position: 54-370
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 83

Conread position: 55-438
Cow position:
Alignm length: 405
Alignm identity: 276
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 93, 65

Conread position: 55-527
Cow position:
Alignm length: 501
Alignm identity: 321
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 26

Conread position: 57-513
Cow position:
Alignm length: 487
Alignm identity: 308
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 28

Conread position: 57-556
Cow position:
Alignm length: 519
Alignm identity: 339
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 50

Conread position: 57-584
Cow position:
Alignm length: 557
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 54

Conread position: 57-619
Cow position:
Alignm length: 590
Alignm identity: 380
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 86, 80

Conread position: 58-510
Cow position:
Alignm length: 472
Alignm identity: 303
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 90

Conread position: 58-565
Cow position:
Alignm length: 534
Alignm identity: 348
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 11, 24

Conread position: 58-576
Cow position:
Alignm length: 544
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 79

Conread position: 58-585
Cow position:
Alignm length: 558
Alignm identity: 360
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 362

Conread position: 58-585
Cow position:
Alignm length: 554
Alignm identity: 351
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 45

Conread position: 60-549
Cow position:
Alignm length: 505
Alignm identity: 319
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 140, 22

Conread position: 60-569
Cow position:
Alignm length: 531
Alignm identity: 337
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 57, 67

Conread position: 63-354
Cow position:
Alignm length: 304
Alignm identity: 200
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 51

Conread position: 63-539
Cow position:
Alignm length: 499
Alignm identity: 307
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 120, 68

Conread position: 71-472
Cow position:
Alignm length: 431
Alignm identity: 292
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 67

Conread position: 75-562
Cow position:
Alignm length: 513
Alignm identity: 327
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 85, 58

Conread position: 88-565
Cow position:
Alignm length: 501
Alignm identity: 326
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 68, 49

Conread position: 88-566
Cow position:
Alignm length: 500
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 49

Conread position: 90-370
Cow position:
Alignm length: 291
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 11

Conread position: 95-447
Cow position:
Alignm length: 368
Alignm identity: 241
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 54, 245

Conread position: 117-566
Cow position:
Alignm length: 474
Alignm identity: 308
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 118

Conread position: 119-704
Cow position:
Alignm length: 608
Alignm identity: 235
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 12, 76

Conread position: 180-590
Cow position:
Alignm length: 417
Alignm identity: 259
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 189, 35

Conread position: 227-550
Cow position:
Alignm length: 338
Alignm identity: 220
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 187

Conread position: 229-566
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 0

Conread position: 229-632
Cow position:
Alignm length: 409
Alignm identity: 261
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 118, 88

Conread position: 236-557
Cow position:
Alignm length: 340
Alignm identity: 222
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 142

Conread position: 242-582
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 114, 25

Conread position: 247-361
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 109, 25

Conread position: 256-565
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 102, 52

Conread position: 260-585
Cow position:
Alignm length: 330
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 280-478
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 49

Conread position: 281-561
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 117

Conread position: 289-549
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 119

Conread position: 296-563
Cow position:
Alignm length: 278
Alignm identity: 188
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 47

Conread position: 319-565
Cow position:
Alignm length: 248
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 143, 35

Conread position: 321-566
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 340-595
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 174, 14

Conread position: 368-564
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 34

Conread position: 386-557
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 47

Conread position: 530-815
Cow position:
Alignm length: 293
Alignm identity: 195
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 230, 41

Conread position: 545-806
Cow position:
Alignm length: 263
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 141, 76

Conread position: 547-773
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 554-806
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 29

Conread position: 558-815
Cow position:
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 560-806
Cow position:
Alignm length: 247
Alignm identity: 164
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 560-812
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 62

Conread position: 564-816
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 60

Conread position: 564-816
Cow position:
Alignm length: 254
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 141, 57

Conread position: 573-814
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 213, 49

Conread position: 573-816
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 120, 39

Conread position: 574-805
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 14

Conread position: 574-805
Cow position:
Alignm length: 233
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 47

Conread position: 574-806
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 35

Conread position: 574-811
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 47

Conread position: 574-816
Cow position:
Alignm length: 245
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 237, 47

Conread position: 575-798
Cow position:
Alignm length: 224
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 575-811
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 14

Conread position: 576-816
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 46

Conread position: 578-805
Cow position:
Alignm length: 228
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 579-816
Cow position:
Alignm length: 240
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 42

Conread position: 584-806
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 588-806
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 589-811
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 74, 10

Conread position: 590-776
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 590-812
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 113, 31

Conread position: 590-812
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 590-813
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 31

Conread position: 590-815
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 590-815
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 590-816
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 592-806
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 29

Conread position: 592-816
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 618-803
Cow position:
Alignm length: 186
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 625-812
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 180, 48

Conread position: 634-805
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 84

Show alignments to all cow chromosomes.