Cow genome map

Conread name: Ss1.1-Pig4-TMW8037D06.5

Conread position: 6-565
Cow position: chr5:4386982-4386420 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 37

Conread position: 6-566
Cow position: chr5:49222729-49223306 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 354
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 137, 57

Conread position: 9-623
Cow position: chr5:35527687-35527069 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 409
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 108, 61

Conread position: 10-497
Cow position: chr5:1665678-1665184 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 26

Conread position: 10-565
Cow position: chr5:46778151-46777576 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 374
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position: chr5:4756425-4757001 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position: chr5:5104972-5104404 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 370
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position: chr5:6586829-6587402 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 370
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 7, 54

Conread position: 10-566
Cow position: chr5:10812992-10813568 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position: chr5:23958571-23959147 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 10-566
Cow position: chr5:59062393-59061820 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 33

Conread position: 10-580
Cow position: chr5:4684048-4684637 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 348
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 7, 30

Conread position: 10-585
Cow position: chr5:31708319-31707727 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 13-565
Cow position: chr5:37734106-37733532 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 30

Conread position: 16-354
Cow position: chr5:46669680-46669337 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 27

Conread position: 16-471
Cow position: chr5:2975540-2975066 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 308
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 121, 47

Conread position: 16-474
Cow position: chr5:51745016-51744556 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 314
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 27

Conread position: 16-522
Cow position: chr5:16102320-16102824 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 327
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 35, 85

Conread position: 16-543
Cow position: chr5:54620790-54620253 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 39

Conread position: 16-563
Cow position: chr5:59284053-59283501 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 33

Conread position: 16-564
Cow position: chr5:28014755-28014219 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 351
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 86, 47

Conread position: 16-564
Cow position: chr5:40922926-40923463 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 16-565
Cow position: chr5:4070964-4070404 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr5:6153146-6153716 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr5:18559659-18560223 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr5:24100393-24099844 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 363
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr5:24296352-24295798 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 358
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position: chr5:46736842-46737406 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 370
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 20, 39

Conread position: 16-565
Cow position: chr5:55629734-55629177 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 367
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-566
Cow position: chr5:987317-987886 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-566
Cow position: chr5:4017460-4018016 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-566
Cow position: chr5:10774513-10775081 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 23

Conread position: 16-566
Cow position: chr5:12730968-12731532 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 16-567
Cow position: chr5:50871359-50870798 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 48

Conread position: 16-571
Cow position: chr5:76096802-76096228 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 368
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 27

Conread position: 16-585
Cow position: chr5:3502355-3502944 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-585
Cow position: chr5:7275580-7275004 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 380
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-585
Cow position: chr5:64780262-64780851 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-603
Cow position: chr5:18886806-18887400 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 387
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 35

Conread position: 16-631
Cow position: chr5:3966194-3965563 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 418
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 27

Conread position: 17-582
Cow position: chr5:18274497-18273923 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 363
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 26

Conread position: 17-583
Cow position: chr5:2916183-2915607 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 378
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 26

Conread position: 17-585
Cow position: chr5:30581084-30580508 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 18-561
Cow position: chr5:49756961-49757517 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 364
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 25

Conread position: 48-335
Cow position: chr5:10449717-10449419 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 252

Conread position: 51-567
Cow position: chr5:69623304-69622767 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 336
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 153

Conread position: 52-583
Cow position: chr5:40789769-40789230 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 333
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 86

Conread position: 55-533
Cow position: chr5:46627687-46628167 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 310
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 30, 279

Conread position: 56-564
Cow position: chr5:31099726-31100245 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 344
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 104, 142

Conread position: 56-566
Cow position: chr5:47829362-47829895 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 354
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 81

Conread position: 59-564
Cow position: chr5:7142363-7142881 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 329
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 10, 362

Conread position: 63-360
Cow position: chr5:41975678-41975976 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 80, 74

Conread position: 63-426
Cow position: chr5:76044886-76044545 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 60

Conread position: 63-601
Cow position: chr5:67911984-67911421 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 368
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 129

Conread position: 63-619
Cow position: chr5:28332800-28333353 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 374
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 93, 103

Conread position: 63-623
Cow position: chr5:26184563-26183987 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 66-550
Cow position: chr5:27198311-27197806 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 337
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 37, 49

Conread position: 75-560
Cow position: chr5:62383498-62383011 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 333
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 84, 208

Conread position: 77-370
Cow position: chr5:12681363-12681664 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 72, 59

Conread position: 77-565
Cow position: chr5:13047329-13046840 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 317
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 11

Conread position: 83-569
Cow position: chr5:18884865-18885355 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 331
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 54

Conread position: 88-358
Cow position: chr5:57937224-57937497 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 18

Conread position: 88-560
Cow position: chr5:674585-674123 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 317
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 100, 29

Conread position: 88-582
Cow position: chr5:23230655-23230150 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 323
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 18

Conread position: 88-583
Cow position: chr5:11115096-11115590 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 319
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 49

Conread position: 89-565
Cow position: chr5:21117427-21116931 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 324
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 94, 48

Conread position: 105-456
Cow position: chr5:14657788-14658160 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 96

Conread position: 108-425
Cow position: chr5:43988759-43988433 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 29

Conread position: 117-561
Cow position: chr5:47892916-47893360 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 307
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 11

Conread position: 129-370
Cow position: chr5:41928587-41928841 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 180-585
Cow position: chr5:34286664-34287069 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 277
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 165, 35

Conread position: 217-586
Cow position: chr5:44219589-44219208 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 249
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 21

Conread position: 228-623
Cow position: chr5:52435265-52434868 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 271
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 20

Conread position: 229-565
Cow position: chr5:35301627-35301281 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 128, 185

Conread position: 229-565
Cow position: chr5:57481010-57481357 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 231
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 122, 173

Conread position: 229-595
Cow position: chr5:75625224-75624843 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 129, 173

Conread position: 229-627
Cow position: chr5:34298423-34298038 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 252
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 129, 63

Conread position: 230-582
Cow position: chr5:41960228-41960582 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 132

Conread position: 236-564
Cow position: chr5:26980947-26980624 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 164, 12

Conread position: 237-627
Cow position: chr5:13742952-13743353 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 260
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 49

Conread position: 242-561
Cow position: chr5:28242532-28242219 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 123, 150

Conread position: 244-539
Cow position: chr5:15376199-15375902 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 132

Conread position: 245-565
Cow position: chr5:1340533-1340847 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 174

Conread position: 247-549
Cow position: chr5:50948144-50947829 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 247-566
Cow position: chr5:42751981-42751659 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 101, 48

Conread position: 267-476
Cow position: chr5:7227339-7227132 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 99

Conread position: 278-548
Cow position: chr5:62203125-62202852 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 78, 88

Conread position: 284-601
Cow position: chr5:38147439-38147141 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 87

Conread position: 286-544
Cow position: chr5:21918868-21918625 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 66, 22

Conread position: 368-565
Cow position: chr5:54791255-54791449 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 26

Conread position: 398-565
Cow position: chr5:22840273-22840437 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 59

Conread position: 436-620
Cow position: chr5:60716308-60716494 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 115, 21

Conread position: 531-816
Cow position: chr5:62812100-62811816 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 51

Conread position: 541-813
Cow position: chr5:56549635-56549359 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 83

Conread position: 545-809
Cow position: chr5:69461591-69461332 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 178, 44

Conread position: 546-776
Cow position: chr5:3817428-3817655 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 9, 28

Conread position: 546-806
Cow position: chr5:34914788-34915051 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 83

Conread position: 547-806
Cow position: chr5:35969796-35969535 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 119, 33

Conread position: 552-813
Cow position: chr5:50858188-50857928 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 169
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 117, 19

Conread position: 552-816
Cow position: chr5:26548894-26549148 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 554-797
Cow position: chr5:17828228-17828468 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 101, 32

Conread position: 554-813
Cow position: chr5:12874005-12873746 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 7, 120

Conread position: 555-812
Cow position: chr5:55966622-55966884 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 68

Conread position: 555-813
Cow position: chr5:56028300-56028544 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 556-803
Cow position: chr5:9893875-9894118 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 161
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 68

Conread position: 557-816
Cow position: chr5:29829639-29829903 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 65

Conread position: 557-816
Cow position: chr5:69099967-69099712 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 560-801
Cow position: chr5:51298471-51298705 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 561-792
Cow position: chr5:35246859-35247096 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 65

Conread position: 564-757
Cow position: chr5:6876720-6876917 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 61

Conread position: 564-814
Cow position: chr5:42064450-42064199 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 59

Conread position: 567-812
Cow position: chr5:22795444-22795213 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 571-815
Cow position: chr5:56071093-56070852 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 52

Conread position: 573-790
Cow position: chr5:74039775-74039985 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 573-816
Cow position: chr5:65941017-65941258 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 18, 93

Conread position: 573-816
Cow position: chr5:66257871-66257631 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 45

Conread position: 574-805
Cow position: chr5:60016395-60016171 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 574-806
Cow position: chr5:21617685-21617460 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 574-806
Cow position: chr5:21829095-21828870 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 574-806
Cow position: chr5:59626741-59626969 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 574-810
Cow position: chr5:35826829-35826600 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 574-812
Cow position: chr5:35685163-35684934 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 14

Conread position: 574-816
Cow position: chr5:69383481-69383247 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 575-806
Cow position: chr5:3582785-3582562 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 575-816
Cow position: chr5:17086788-17087028 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 13

Conread position: 575-816
Cow position: chr5:20288028-20288270 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 88, 46

Conread position: 576-815
Cow position: chr5:44028078-44028310 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 576-816
Cow position: chr5:26467856-26467618 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 164, 32

Conread position: 577-812
Cow position: chr5:24995994-24996225 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 11

Conread position: 577-812
Cow position: chr5:64175901-64176130 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 45

Conread position: 585-813
Cow position: chr5:31475904-31475677 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 32

Conread position: 590-811
Cow position: chr5:30276902-30276687 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 35

Conread position: 590-812
Cow position: chr5:43403124-43402901 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 31

Conread position: 590-813
Cow position: chr5:56059849-56060075 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 109

Conread position: 590-815
Cow position: chr5:40109699-40109486 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 32

Conread position: 590-816
Cow position: chr5:17105060-17104845 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 596-814
Cow position: chr5:12434744-12434538 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 599-796
Cow position: chr5:46704094-46704287 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 599-816
Cow position: chr5:65753066-65752850 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 22

Conread position: 602-812
Cow position: chr5:64026812-64027023 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 19

Conread position: 619-806
Cow position: chr5:17602018-17602198 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 619-806
Cow position: chr5:57074145-57074329 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.