Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037D06.5 |
| Conread position: | 10-556 |
| Cow position: | chr9:1074350-1074917 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 374 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 10-560 |
| Cow position: | chr9:26737749-26737168 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 370 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 7, 62 |
| Conread position: | 10-565 |
| Cow position: | chr9:1994583-1995136 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 368 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 10-566 |
| Cow position: | chr9:1250174-1250748 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 30 |
| Conread position: | 10-566 |
| Cow position: | chr9:28679780-28679224 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 376 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 10-566 |
| Cow position: | chr9:64014848-64015421 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 373 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 10-567 |
| Cow position: | chr9:45875338-45874766 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 30 |
| Conread position: | 10-585 |
| Cow position: | chr9:44385074-44384494 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 10-586 |
| Cow position: | chr9:2680102-2679500 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 394 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 7, 131 |
| Conread position: | 10-623 |
| Cow position: | chr9:47043785-47043154 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 11-566 |
| Cow position: | chr9:8781105-8781660 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 16-371 |
| Cow position: | chr9:6709774-6709411 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 16-492 |
| Cow position: | chr9:8167375-8167845 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 23 |
| Conread position: | 16-498 |
| Cow position: | chr9:64027247-64026757 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 16-556 |
| Cow position: | chr9:38677958-38677406 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-561 |
| Cow position: | chr9:9707936-9707381 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 373 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 16-564 |
| Cow position: | chr9:9014887-9014326 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 370 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 120, 34 |
| Conread position: | 16-565 |
| Cow position: | chr9:17304158-17304725 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-565 |
| Cow position: | chr9:18508014-18508573 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 372 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 16-565 |
| Cow position: | chr9:21411123-21410551 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 16-565 |
| Cow position: | chr9:27036718-27036153 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 360 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 16-565 |
| Cow position: | chr9:27784001-27783441 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 372 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-565 |
| Cow position: | chr9:37161000-37161560 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 369 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 127, 23 |
| Conread position: | 16-565 |
| Cow position: | chr9:37969408-37969958 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-566 |
| Cow position: | chr9:779005-779569 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 368 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-567 |
| Cow position: | chr9:220730-221287 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 356 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-585 |
| Cow position: | chr9:42311508-42310910 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 394 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 16-588 |
| Cow position: | chr9:129378-129966 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 371 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-609 |
| Cow position: | chr9:44819946-44819355 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 390 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-620 |
| Cow position: | chr9:28023620-28022995 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 17-324 |
| Cow position: | chr9:31090995-31090678 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 102, 46 |
| Conread position: | 18-544 |
| Cow position: | chr9:4717979-4717446 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 343 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 18-557 |
| Cow position: | chr9:2212956-2212398 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 359 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 18-565 |
| Cow position: | chr9:7004549-7003980 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 367 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 18-565 |
| Cow position: | chr9:51180364-51180929 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 18-584 |
| Cow position: | chr9:17062573-17063153 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 18-612 |
| Cow position: | chr9:35594276-35594880 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 390 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 24-591 |
| Cow position: | chr9:38714720-38715287 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 361 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 39-337 |
| Cow position: | chr9:49456947-49456640 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 49 |
| Conread position: | 43-514 |
| Cow position: | chr9:14040394-14040855 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 115, 11 |
| Conread position: | 56-561 |
| Cow position: | chr9:6978093-6977580 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 333 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 56-561 |
| Cow position: | chr9:59428777-59428260 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 336 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 13, 154 |
| Conread position: | 57-566 |
| Cow position: | chr9:51212460-51211933 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 349 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 57-584 |
| Cow position: | chr9:827335-827875 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 357 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 58-389 |
| Cow position: | chr9:9328226-9328564 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 58-417 |
| Cow position: | chr9:29043987-29044357 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 141 |
| Conread position: | 58-510 |
| Cow position: | chr9:4307592-4308057 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 58-559 |
| Cow position: | chr9:4283735-4283237 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 332 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 245 |
| Conread position: | 58-565 |
| Cow position: | chr9:20940074-20939561 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 348 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 58-566 |
| Cow position: | chr9:25904298-25903773 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 348 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 58-585 |
| Cow position: | chr9:5005765-5005217 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 362 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 11, 184 |
| Conread position: | 58-590 |
| Cow position: | chr9:866880-867416 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 349 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 59-398 |
| Cow position: | chr9:32294582-32294927 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 63-358 |
| Cow position: | chr9:27691149-27691458 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 130 |
| Conread position: | 63-561 |
| Cow position: | chr9:54926303-54925785 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 334 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 63-582 |
| Cow position: | chr9:10548417-10547890 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 60 |
| Conread position: | 64-325 |
| Cow position: | chr9:54680980-54681247 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 49 |
| Conread position: | 83-584 |
| Cow position: | chr9:46041499-46042018 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 345 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 88-463 |
| Cow position: | chr9:17069192-17069574 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 89-391 |
| Cow position: | chr9:59509414-59509725 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 293 |
| Conread position: | 98-583 |
| Cow position: | chr9:650285-650797 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 328 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 326 |
| Conread position: | 105-453 |
| Cow position: | chr9:52035561-52035204 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 112 |
| Conread position: | 111-600 |
| Cow position: | chr9:4666891-4666385 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 328 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 111-628 |
| Cow position: | chr9:9647866-9647347 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 345 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 113-565 |
| Cow position: | chr9:30674100-30673630 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 303 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 114-563 |
| Cow position: | chr9:46272836-46272374 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 295 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 135-584 |
| Cow position: | chr9:60462240-60462694 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 134 |
| Conread position: | 178-560 |
| Cow position: | chr9:13118666-13119042 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 187, 47 |
| Conread position: | 179-581 |
| Cow position: | chr9:22192924-22192515 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 230 |
| Conread position: | 180-564 |
| Cow position: | chr9:26568235-26567853 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 221-549 |
| Cow position: | chr9:38440790-38440449 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 163, 148 |
| Conread position: | 224-567 |
| Cow position: | chr9:20176123-20176459 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 67 |
| Conread position: | 225-464 |
| Cow position: | chr9:9364900-9365146 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 229-456 |
| Cow position: | chr9:41975256-41975021 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 229-549 |
| Cow position: | chr9:49514887-49515214 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 110, 254 |
| Conread position: | 229-566 |
| Cow position: | chr9:50093641-50093988 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 82, 78 |
| Conread position: | 237-567 |
| Cow position: | chr9:46460481-46460811 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 121, 134 |
| Conread position: | 239-473 |
| Cow position: | chr9:9462237-9462481 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 168 |
| Conread position: | 242-562 |
| Cow position: | chr9:5142280-5141951 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 80, 42 |
| Conread position: | 253-590 |
| Cow position: | chr9:3935885-3936218 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 118 |
| Conread position: | 256-565 |
| Cow position: | chr9:4534062-4533743 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 102, 157 |
| Conread position: | 256-565 |
| Cow position: | chr9:32970511-32970194 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 83, 157 |
| Conread position: | 257-565 |
| Cow position: | chr9:10938161-10937845 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 12, 146 |
| Conread position: | 280-588 |
| Cow position: | chr9:29627206-29627524 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 284-566 |
| Cow position: | chr9:7041132-7040834 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 193 |
| Conread position: | 295-565 |
| Cow position: | chr9:22655109-22654829 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 119 |
| Conread position: | 330-565 |
| Cow position: | chr9:59481314-59481547 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 373-565 |
| Cow position: | chr9:60276577-60276766 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 529-759 |
| Cow position: | chr9:48901059-48900830 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 529-782 |
| Cow position: | chr9:41470324-41470069 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 95 |
| Conread position: | 539-816 |
| Cow position: | chr9:12337693-12337964 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 541-795 |
| Cow position: | chr9:58132156-58131911 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 545-805 |
| Cow position: | chr9:32662237-32661974 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 553-811 |
| Cow position: | chr9:26279369-26279112 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 557-813 |
| Cow position: | chr9:26477019-26477277 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 557-814 |
| Cow position: | chr9:45285727-45285474 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 557-815 |
| Cow position: | chr9:33584875-33584624 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 557-816 |
| Cow position: | chr9:34410587-34410334 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 558-810 |
| Cow position: | chr9:17840868-17840621 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 558-816 |
| Cow position: | chr9:34286605-34286863 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 559-812 |
| Cow position: | chr9:33822927-33823177 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 123, 49 |
| Conread position: | 559-816 |
| Cow position: | chr9:41728070-41728321 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 560-808 |
| Cow position: | chr9:28747708-28747465 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 560-812 |
| Cow position: | chr9:4341347-4341100 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 562-814 |
| Cow position: | chr9:27279117-27279371 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 562-816 |
| Cow position: | chr9:13169855-13169600 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 563-811 |
| Cow position: | chr9:53109067-53109308 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 116, 17 |
| Conread position: | 564-816 |
| Cow position: | chr9:6189549-6189304 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 571-812 |
| Cow position: | chr9:24887028-24887266 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 131, 17 |
| Conread position: | 574-810 |
| Cow position: | chr9:37198952-37199184 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 574-812 |
| Cow position: | chr9:9596125-9595891 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 178, 47 |
| Conread position: | 574-815 |
| Cow position: | chr9:55795583-55795817 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 575-811 |
| Cow position: | chr9:5263331-5263556 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 575-814 |
| Cow position: | chr9:45728603-45728840 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 576-811 |
| Cow position: | chr9:38792843-38793074 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 576-815 |
| Cow position: | chr9:61302829-61303062 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 586-806 |
| Cow position: | chr9:29195195-29194971 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 35 |
| Conread position: | 590-806 |
| Cow position: | chr9:17872266-17872057 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 590-808 |
| Cow position: | chr9:20942778-20942556 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 590-813 |
| Cow position: | chr9:53139294-53139070 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 590-814 |
| Cow position: | chr9:60395208-60394987 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 590-815 |
| Cow position: | chr9:21460312-21460092 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 591-795 |
| Cow position: | chr9:22165875-22165671 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 591-801 |
| Cow position: | chr9:34958210-34958008 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 592-759 |
| Cow position: | chr9:40984347-40984511 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 592-811 |
| Cow position: | chr9:34024542-34024757 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 592-812 |
| Cow position: | chr9:12910557-12910342 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 595-805 |
| Cow position: | chr9:29006405-29006609 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 596-806 |
| Cow position: | chr9:57131345-57131548 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 618-804 |
| Cow position: | chr9:33120023-33119837 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 618-805 |
| Cow position: | chr9:39011602-39011417 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 651-812 |
| Cow position: | chr9:4268084-4267923 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 651-816 |
| Cow position: | chr9:8562722-8562884 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 153, 22 |
| Conread position: | 655-801 |
| Cow position: | chr9:55354515-55354659 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.