Cow genome map

Conread name: Ss1.1-Pig4-TMW8037D06.5

Conread position: 10-556
Cow position:
Alignm length: 576
Alignm identity: 374
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 45

Conread position: 10-560
Cow position:
Alignm length: 589
Alignm identity: 370
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 62

Conread position: 10-565
Cow position:
Alignm length: 571
Alignm identity: 368
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 26, 33

Conread position: 10-566
Cow position:
Alignm length: 583
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 30

Conread position: 10-566
Cow position:
Alignm length: 578
Alignm identity: 376
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 6, 45

Conread position: 10-566
Cow position:
Alignm length: 580
Alignm identity: 373
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 54

Conread position: 10-567
Cow position:
Alignm length: 581
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 30

Conread position: 10-585
Cow position:
Alignm length: 595
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 10-586
Cow position:
Alignm length: 612
Alignm identity: 394
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 7, 131

Conread position: 10-623
Cow position:
Alignm length: 643
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 11-566
Cow position:
Alignm length: 570
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 16-371
Cow position:
Alignm length: 370
Alignm identity: 241
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 23

Conread position: 16-492
Cow position:
Alignm length: 487
Alignm identity: 314
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 23

Conread position: 16-498
Cow position:
Alignm length: 498
Alignm identity: 309
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 40

Conread position: 16-556
Cow position:
Alignm length: 566
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-561
Cow position:
Alignm length: 571
Alignm identity: 373
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 20, 41

Conread position: 16-564
Cow position:
Alignm length: 575
Alignm identity: 370
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 120, 34

Conread position: 16-565
Cow position:
Alignm length: 575
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 578
Alignm identity: 372
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 23

Conread position: 16-565
Cow position:
Alignm length: 579
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 35

Conread position: 16-565
Cow position:
Alignm length: 572
Alignm identity: 360
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 127, 47

Conread position: 16-565
Cow position:
Alignm length: 576
Alignm identity: 372
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 27

Conread position: 16-565
Cow position:
Alignm length: 572
Alignm identity: 369
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 127, 23

Conread position: 16-565
Cow position:
Alignm length: 566
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 16-566
Cow position:
Alignm length: 576
Alignm identity: 368
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 20, 27

Conread position: 16-567
Cow position:
Alignm length: 571
Alignm identity: 356
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 27

Conread position: 16-585
Cow position:
Alignm length: 607
Alignm identity: 394
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 47

Conread position: 16-588
Cow position:
Alignm length: 598
Alignm identity: 371
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 27

Conread position: 16-609
Cow position:
Alignm length: 611
Alignm identity: 390
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 27

Conread position: 16-620
Cow position:
Alignm length: 635
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 17-324
Cow position:
Alignm length: 321
Alignm identity: 208
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 102, 46

Conread position: 18-544
Cow position:
Alignm length: 541
Alignm identity: 343
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 25

Conread position: 18-557
Cow position:
Alignm length: 565
Alignm identity: 359
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 26

Conread position: 18-565
Cow position:
Alignm length: 575
Alignm identity: 367
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 18, 36

Conread position: 18-565
Cow position:
Alignm length: 572
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 25

Conread position: 18-584
Cow position:
Alignm length: 588
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 25

Conread position: 18-612
Cow position:
Alignm length: 619
Alignm identity: 390
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 25

Conread position: 24-591
Cow position:
Alignm length: 586
Alignm identity: 361
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 11

Conread position: 39-337
Cow position:
Alignm length: 312
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 49

Conread position: 43-514
Cow position:
Alignm length: 486
Alignm identity: 322
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 115, 11

Conread position: 56-561
Cow position:
Alignm length: 528
Alignm identity: 333
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 14

Conread position: 56-561
Cow position:
Alignm length: 524
Alignm identity: 336
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 13, 154

Conread position: 57-566
Cow position:
Alignm length: 536
Alignm identity: 349
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 50

Conread position: 57-584
Cow position:
Alignm length: 553
Alignm identity: 357
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 92, 47

Conread position: 58-389
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 80

Conread position: 58-417
Cow position:
Alignm length: 373
Alignm identity: 245
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 141

Conread position: 58-510
Cow position:
Alignm length: 475
Alignm identity: 308
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 35

Conread position: 58-559
Cow position:
Alignm length: 514
Alignm identity: 332
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 102, 245

Conread position: 58-565
Cow position:
Alignm length: 530
Alignm identity: 348
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 28

Conread position: 58-566
Cow position:
Alignm length: 533
Alignm identity: 348
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 85, 19

Conread position: 58-585
Cow position:
Alignm length: 559
Alignm identity: 362
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 184

Conread position: 58-590
Cow position:
Alignm length: 551
Alignm identity: 349
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 10, 80

Conread position: 59-398
Cow position:
Alignm length: 353
Alignm identity: 233
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 101, 68

Conread position: 63-358
Cow position:
Alignm length: 314
Alignm identity: 209
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 130

Conread position: 63-561
Cow position:
Alignm length: 526
Alignm identity: 334
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 74

Conread position: 63-582
Cow position:
Alignm length: 543
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 60

Conread position: 64-325
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 49

Conread position: 83-584
Cow position:
Alignm length: 531
Alignm identity: 345
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 19, 24

Conread position: 88-463
Cow position:
Alignm length: 396
Alignm identity: 267
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 67, 43

Conread position: 89-391
Cow position:
Alignm length: 315
Alignm identity: 205
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 293

Conread position: 98-583
Cow position:
Alignm length: 519
Alignm identity: 328
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 326

Conread position: 105-453
Cow position:
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 112

Conread position: 111-600
Cow position:
Alignm length: 513
Alignm identity: 328
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 71, 36

Conread position: 111-628
Cow position:
Alignm length: 539
Alignm identity: 345
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 26

Conread position: 113-565
Cow position:
Alignm length: 475
Alignm identity: 303
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 30, 24

Conread position: 114-563
Cow position:
Alignm length: 472
Alignm identity: 295
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 23

Conread position: 135-584
Cow position:
Alignm length: 461
Alignm identity: 291
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 134

Conread position: 178-560
Cow position:
Alignm length: 390
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 187, 47

Conread position: 179-581
Cow position:
Alignm length: 417
Alignm identity: 260
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 230

Conread position: 180-564
Cow position:
Alignm length: 399
Alignm identity: 264
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 175, 44

Conread position: 221-549
Cow position:
Alignm length: 344
Alignm identity: 220
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 163, 148

Conread position: 224-567
Cow position:
Alignm length: 348
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 67

Conread position: 225-464
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 80

Conread position: 229-456
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 41

Conread position: 229-549
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 110, 254

Conread position: 229-566
Cow position:
Alignm length: 351
Alignm identity: 241
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 82, 78

Conread position: 237-567
Cow position:
Alignm length: 336
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 134

Conread position: 239-473
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 168

Conread position: 242-562
Cow position:
Alignm length: 337
Alignm identity: 221
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 42

Conread position: 253-590
Cow position:
Alignm length: 345
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 118

Conread position: 256-565
Cow position:
Alignm length: 323
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 157

Conread position: 256-565
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 83, 157

Conread position: 257-565
Cow position:
Alignm length: 323
Alignm identity: 215
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 12, 146

Conread position: 280-588
Cow position:
Alignm length: 326
Alignm identity: 214
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 135

Conread position: 284-566
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 193

Conread position: 295-565
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 119

Conread position: 330-565
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 59

Conread position: 373-565
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 17

Conread position: 529-759
Cow position:
Alignm length: 232
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 53

Conread position: 529-782
Cow position:
Alignm length: 259
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 95

Conread position: 539-816
Cow position:
Alignm length: 278
Alignm identity: 177
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 541-795
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 48

Conread position: 545-805
Cow position:
Alignm length: 269
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 35

Conread position: 553-811
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 18

Conread position: 557-813
Cow position:
Alignm length: 261
Alignm identity: 170
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 65

Conread position: 557-814
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 129, 25

Conread position: 557-815
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 557-816
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 60

Conread position: 558-810
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 558-816
Cow position:
Alignm length: 262
Alignm identity: 184
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 19, 65

Conread position: 559-812
Cow position:
Alignm length: 255
Alignm identity: 169
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 123, 49

Conread position: 559-816
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 12

Conread position: 560-808
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 62

Conread position: 560-812
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 63

Conread position: 562-814
Cow position:
Alignm length: 258
Alignm identity: 172
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 65

Conread position: 562-816
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 62

Conread position: 563-811
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 17

Conread position: 564-816
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 58

Conread position: 571-812
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 131, 17

Conread position: 574-810
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 574-812
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 178, 47

Conread position: 574-815
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 575-811
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 575-814
Cow position:
Alignm length: 242
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 48

Conread position: 576-811
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 12

Conread position: 576-815
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 46

Conread position: 586-806
Cow position:
Alignm length: 226
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 35

Conread position: 590-806
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 590-808
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 24

Conread position: 590-813
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 31

Conread position: 590-814
Cow position:
Alignm length: 225
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 590-815
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 33

Conread position: 591-795
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 33

Conread position: 591-801
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 592-759
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 592-811
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 592-812
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 595-805
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 596-806
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 618-804
Cow position:
Alignm length: 187
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 618-805
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 651-812
Cow position:
Alignm length: 162
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 651-816
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 153, 22

Conread position: 655-801
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.