Cow genome map

Conread name: Ss1.1-Pig4-TMW8037M09.5

Conread position: 986-1211
Cow position: chr1:15366919-15366680 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 227

Conread position: 1009-1207
Cow position: chr1:23310773-23310980 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 7

Conread position: 1028-1212
Cow position: chr1:77452453-77452649 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 1029-1200
Cow position: chr1:68856323-68856492 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 33

Conread position: 1029-1201
Cow position: chr1:79207006-79207184 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 99

Conread position: 1029-1206
Cow position: chr1:22774256-22774077 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 52, 89

Conread position: 1030-1176
Cow position: chr1:13132738-13132591 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 66

Conread position: 1030-1185
Cow position: chr1:44377022-44377185 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 10

Conread position: 1030-1192
Cow position: chr1:779734-779900 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 41, 89

Conread position: 1030-1201
Cow position: chr1:3090785-3090957 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 48

Conread position: 1030-1201
Cow position: chr1:24222366-24222540 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 27

Conread position: 1030-1202
Cow position: chr1:4278918-4279084 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 84

Conread position: 1030-1202
Cow position: chr1:5577426-5577249 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 21

Conread position: 1030-1202
Cow position: chr1:6456099-6455927 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 125

Conread position: 1030-1202
Cow position: chr1:13245686-13245511 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 9

Conread position: 1030-1202
Cow position: chr1:45858847-45859019 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 9

Conread position: 1030-1202
Cow position: chr1:46228693-46228513 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 101

Conread position: 1030-1202
Cow position: chr1:53755098-53755264 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 1030-1202
Cow position: chr1:64973972-64974149 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 149

Conread position: 1030-1202
Cow position: chr1:66655610-66655783 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 64, 18

Conread position: 1030-1202
Cow position: chr1:99858310-99858490 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 153

Conread position: 1030-1205
Cow position: chr1:33538387-33538569 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 1030-1205
Cow position: chr1:53648344-53648524 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 100

Conread position: 1030-1205
Cow position: chr1:71453721-71453544 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 83

Conread position: 1030-1206
Cow position: chr1:16299438-16299617 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1206
Cow position: chr1:18484373-18484189 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 88

Conread position: 1030-1206
Cow position: chr1:37432391-37432580 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 105

Conread position: 1030-1206
Cow position: chr1:42505305-42505127 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 45, 115

Conread position: 1030-1206
Cow position: chr1:49961810-49961635 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 9

Conread position: 1030-1206
Cow position: chr1:52066267-52066431 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 14

Conread position: 1030-1206
Cow position: chr1:58194795-58194616 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 41, 9

Conread position: 1030-1206
Cow position: chr1:91040370-91040542 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 89

Conread position: 1030-1207
Cow position: chr1:5540947-5540762 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 47, 65

Conread position: 1030-1207
Cow position: chr1:12884500-12884317 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 132

Conread position: 1030-1207
Cow position: chr1:20077828-20077642 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 89

Conread position: 1030-1207
Cow position: chr1:40646876-40647061 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1030-1207
Cow position: chr1:41732000-41731817 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 1030-1207
Cow position: chr1:43218271-43218451 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 18

Conread position: 1030-1207
Cow position: chr1:53703667-53703493 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 149
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 149

Conread position: 1030-1207
Cow position: chr1:67519940-67519764 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 108

Conread position: 1030-1207
Cow position: chr1:79656762-79656941 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 148, 68

Conread position: 1030-1207
Cow position: chr1:83039249-83039427 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 21

Conread position: 1030-1207
Cow position: chr1:91043351-91043530 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 101

Conread position: 1030-1208
Cow position: chr1:33441656-33441479 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 64

Conread position: 1030-1209
Cow position: chr1:5215396-5215214 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 64

Conread position: 1030-1209
Cow position: chr1:6717334-6717146 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1209
Cow position: chr1:52085375-52085196 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 40

Conread position: 1030-1209
Cow position: chr1:92661661-92661479 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 106

Conread position: 1030-1210
Cow position: chr1:64608911-64608732 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 100

Conread position: 1030-1212
Cow position: chr1:1743206-1743015 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 1030-1212
Cow position: chr1:6334201-6334010 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1030-1212
Cow position: chr1:22440357-22440546 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 82

Conread position: 1030-1212
Cow position: chr1:25014705-25014887 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 150

Conread position: 1030-1212
Cow position: chr1:31274224-31274034 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1212
Cow position: chr1:47023751-47023571 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 53

Conread position: 1030-1212
Cow position: chr1:56439870-56440064 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1212
Cow position: chr1:58881924-58881732 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 136

Conread position: 1030-1212
Cow position: chr1:70035283-70035466 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 9

Conread position: 1030-1212
Cow position: chr1:79915604-79915794 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 177

Conread position: 1030-1212
Cow position: chr1:84778245-84778431 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1030-1212
Cow position: chr1:85867190-85867378 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 41, 70

Conread position: 1030-1212
Cow position: chr1:88482708-88482895 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 101

Conread position: 1030-1212
Cow position: chr1:97538107-97538305 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 1032-1210
Cow position: chr1:43404675-43404861 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 162

Conread position: 1033-1212
Cow position: chr1:62301578-62301401 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 149
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 147

Conread position: 1034-1205
Cow position: chr1:95872602-95872433 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 31

Conread position: 1036-1202
Cow position: chr1:6322313-6322476 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 18

Conread position: 1037-1211
Cow position: chr1:19554446-19554629 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1037-1211
Cow position: chr1:65073632-65073452 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1037-1212
Cow position: chr1:7315076-7315259 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1038-1209
Cow position: chr1:57977628-57977465 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 34

Conread position: 1038-1212
Cow position: chr1:54631200-54631017 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 33, 58

Conread position: 1039-1210
Cow position: chr1:26411419-26411244 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 46

Conread position: 1042-1207
Cow position: chr1:10126872-10127043 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 91

Conread position: 1044-1172
Cow position: chr1:99470670-99470541 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 36

Conread position: 1045-1212
Cow position: chr1:13039119-13039285 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 51

Conread position: 1046-1200
Cow position: chr1:49369792-49369952 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1046-1205
Cow position: chr1:78069391-78069222 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 1056-1212
Cow position: chr1:37306170-37306010 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 1066-1198
Cow position: chr1:33310185-33310053 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 11

Conread position: 1066-1212
Cow position: chr1:21582898-21583052 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 100

Conread position: 1097-1210
Cow position: chr1:42315903-42315790 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 103

Show alignments to all cow chromosomes.