Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 992-1177 |
| Cow position: | chr10:65361905-65362098 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 1012-1205 |
| Cow position: | chr10:35013421-35013612 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 1028-1200 |
| Cow position: | chr10:29822434-29822617 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1028-1201 |
| Cow position: | chr10:42478571-42478400 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 5, 113 |
| Conread position: | 1028-1205 |
| Cow position: | chr10:60825944-60825759 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1028-1207 |
| Cow position: | chr10:19540671-19540487 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 6, 158 |
| Conread position: | 1028-1212 |
| Cow position: | chr10:12936935-12937129 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 136 |
| Conread position: | 1028-1212 |
| Cow position: | chr10:28527064-28526870 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 5, 102 |
| Conread position: | 1029-1202 |
| Cow position: | chr10:46451672-46451490 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1029-1211 |
| Cow position: | chr10:58264510-58264319 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1029-1212 |
| Cow position: | chr10:50964101-50964290 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1030-1137 |
| Cow position: | chr10:20507832-20507722 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1030-1184 |
| Cow position: | chr10:4720987-4721152 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1030-1198 |
| Cow position: | chr10:23873330-23873160 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 1030-1200 |
| Cow position: | chr10:34137065-34136891 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1030-1200 |
| Cow position: | chr10:57773758-57773935 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr10:7506929-7506749 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr10:39244858-39244681 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 1030-1202 |
| Cow position: | chr10:52132305-52132487 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr10:54824918-54824738 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr10:58492217-58492044 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 116, 40 |
| Conread position: | 1030-1203 |
| Cow position: | chr10:49058540-49058721 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 1030-1204 |
| Cow position: | chr10:17887946-17888125 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 1030-1204 |
| Cow position: | chr10:39645878-39646051 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 1030-1204 |
| Cow position: | chr10:41085318-41085493 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 8 |
| Conread position: | 1030-1205 |
| Cow position: | chr10:10203192-10203014 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 1030-1205 |
| Cow position: | chr10:24586053-24585872 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1030-1206 |
| Cow position: | chr10:1004721-1004905 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 40, 95 |
| Conread position: | 1030-1206 |
| Cow position: | chr10:15603758-15603578 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 1030-1206 |
| Cow position: | chr10:29291272-29291453 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 1030-1206 |
| Cow position: | chr10:30249939-30250118 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 1030-1206 |
| Cow position: | chr10:30721375-30721560 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr10:3837942-3838127 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr10:26673340-26673532 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 1030-1207 |
| Cow position: | chr10:50162892-50163080 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1030-1208 |
| Cow position: | chr10:8861187-8861370 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 160 |
| Conread position: | 1030-1208 |
| Cow position: | chr10:31385672-31385850 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 53, 89 |
| Conread position: | 1030-1209 |
| Cow position: | chr10:881869-882047 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 1030-1209 |
| Cow position: | chr10:40158846-40159025 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 1030-1209 |
| Cow position: | chr10:53972693-53972506 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 64 |
| Conread position: | 1030-1211 |
| Cow position: | chr10:26731010-26730821 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 121 |
| Conread position: | 1030-1212 |
| Cow position: | chr10:32532399-32532586 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 40, 156 |
| Conread position: | 1030-1212 |
| Cow position: | chr10:33073791-33073601 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1030-1212 |
| Cow position: | chr10:47424543-47424365 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 40 |
| Conread position: | 1030-1212 |
| Cow position: | chr10:48479357-48479172 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr10:48568817-48568625 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 40, 184 |
| Conread position: | 1030-1212 |
| Cow position: | chr10:60242874-60243055 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 145, 18 |
| Conread position: | 1030-1212 |
| Cow position: | chr10:64163118-64163310 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1031-1196 |
| Cow position: | chr10:5070629-5070797 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 1031-1207 |
| Cow position: | chr10:5744913-5744738 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 149, 52 |
| Conread position: | 1031-1209 |
| Cow position: | chr10:28193798-28193624 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 1031-1211 |
| Cow position: | chr10:50429518-50429700 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 29, 88 |
| Conread position: | 1031-1211 |
| Cow position: | chr10:57993844-57993656 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1031-1212 |
| Cow position: | chr10:28103751-28103566 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 1031-1212 |
| Cow position: | chr10:41526673-41526846 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 1036-1212 |
| Cow position: | chr10:49680262-49680444 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 169 |
| Conread position: | 1037-1207 |
| Cow position: | chr10:7268111-7267938 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 121 |
| Conread position: | 1037-1209 |
| Cow position: | chr10:60768038-60768216 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 151 |
| Conread position: | 1037-1212 |
| Cow position: | chr10:57503782-57503966 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1038-1207 |
| Cow position: | chr10:47181570-47181395 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1039-1212 |
| Cow position: | chr10:9343680-9343857 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1042-1206 |
| Cow position: | chr10:30358088-30357919 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 35, 101 |
| Conread position: | 1043-1207 |
| Cow position: | chr10:38821723-38821884 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 1044-1207 |
| Cow position: | chr10:53066855-53066686 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 1046-1202 |
| Cow position: | chr10:19188538-19188703 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1046-1205 |
| Cow position: | chr10:64219641-64219478 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 1046-1212 |
| Cow position: | chr10:26014153-26013984 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 24 |
| Conread position: | 1061-1207 |
| Cow position: | chr10:51989357-51989509 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1063-1205 |
| Cow position: | chr10:270863-271009 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 1065-1212 |
| Cow position: | chr10:52640388-52640537 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 1072-1210 |
| Cow position: | chr10:46073621-46073764 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1083-1212 |
| Cow position: | chr10:11571545-11571410 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1089-1202 |
| Cow position: | chr10:39644155-39644043 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 98 |
| Conread position: | 1096-1211 |
| Cow position: | chr10:66878415-66878298 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 88, 5 |
Show alignments to all cow chromosomes.