Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037M09.5
        

               Conread position:
               1002-1211
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               1004-1202
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1028-1212
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               41, 66
               

               Conread position:
               1028-1212
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 52
               

               Conread position:
               1028-1212
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               1029-1210
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               1029-1212
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               1029-1212
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 9
               

               Conread position:
               1030-1177
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1030-1179
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               1030-1195
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1030-1200
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 100
               

               Conread position:
               1030-1201
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               1030-1201
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1030-1202
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               28, 150
               

               Conread position:
               1030-1202
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               41, 128
               

               Conread position:
               1030-1202
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               148, 64
               

               Conread position:
               1030-1202
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               1030-1202
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 114
               

               Conread position:
               1030-1205
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               1030-1205
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1030-1205
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 116
               

               Conread position:
               1030-1205
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               39, 83
               

               Conread position:
               1030-1206
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               148, 15
               

               Conread position:
               1030-1206
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1030-1206
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 64
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               51, 35
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 86
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               1030-1208
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1030-1208
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               1030-1208
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1030-1209
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 115
               

               Conread position:
               1030-1209
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               39, 127
               

               Conread position:
               1030-1211
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1030-1211
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               1030-1211
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               35, 101
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 105
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               1031-1207
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 148
               

               Conread position:
               1033-1205
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1034-1209
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               110, 58
               

               Conread position:
               1036-1206
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               35, 83
               

               Conread position:
               1037-1207
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               1040-1209
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1041-1193
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               32, 140
               

               Conread position:
               1041-1207
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1043-1212
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               1044-1202
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               1056-1207
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               1098-1208
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               1109-1212
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 0
               
Show alignments to all cow chromosomes.