Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1028-1210 |
| Cow position: | chr12:6857077-6856900 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 5, 34 |
| Conread position: | 1028-1212 |
| Cow position: | chr12:41732167-41732348 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 5, 43 |
| Conread position: | 1029-1204 |
| Cow position: | chr12:3896545-3896363 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1029-1212 |
| Cow position: | chr12:10760831-10760643 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 1030-1192 |
| Cow position: | chr12:9450258-9450088 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 40, 134 |
| Conread position: | 1030-1193 |
| Cow position: | chr12:31805872-31806037 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 1030-1194 |
| Cow position: | chr12:27437616-27437446 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr12:4347978-4347797 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr12:8909126-8908952 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 58, 124 |
| Conread position: | 1030-1202 |
| Cow position: | chr12:11352465-11352287 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 157 |
| Conread position: | 1030-1202 |
| Cow position: | chr12:39338150-39338328 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 1030-1204 |
| Cow position: | chr12:22448714-22448532 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 1030-1206 |
| Cow position: | chr12:38748261-38748093 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 1030-1206 |
| Cow position: | chr12:42466852-42467033 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 1030-1207 |
| Cow position: | chr12:10798528-10798353 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 91 |
| Conread position: | 1030-1210 |
| Cow position: | chr12:27093626-27093445 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 1030-1211 |
| Cow position: | chr12:7089177-7088980 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1030-1211 |
| Cow position: | chr12:19509255-19509438 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 1030-1212 |
| Cow position: | chr12:4734002-4734184 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 148 |
| Conread position: | 1030-1212 |
| Cow position: | chr12:9746586-9746767 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 1030-1212 |
| Cow position: | chr12:14236358-14236543 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 99 |
| Conread position: | 1031-1196 |
| Cow position: | chr12:34133376-34133202 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1031-1207 |
| Cow position: | chr12:10202236-10202064 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 1031-1212 |
| Cow position: | chr12:17990255-17990428 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 1034-1201 |
| Cow position: | chr12:29852530-29852350 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1035-1209 |
| Cow position: | chr12:22507830-22508008 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 159 |
| Conread position: | 1037-1212 |
| Cow position: | chr12:9439989-9439808 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 1043-1205 |
| Cow position: | chr12:40206840-40207007 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1046-1206 |
| Cow position: | chr12:36409648-36409488 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 1046-1207 |
| Cow position: | chr12:37898445-37898281 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 72 |
| Conread position: | 1052-1198 |
| Cow position: | chr12:36324090-36323945 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 1053-1210 |
| Cow position: | chr12:39827417-39827578 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 134 |
| Conread position: | 1055-1204 |
| Cow position: | chr12:1205781-1205627 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 1065-1212 |
| Cow position: | chr12:16154273-16154421 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 1084-1206 |
| Cow position: | chr12:4837129-4837251 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 1094-1206 |
| Cow position: | chr12:27800036-27800150 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.