Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1029-1178 |
| Cow position: | chr15:43233040-43232893 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 1029-1205 |
| Cow position: | chr15:15285586-15285401 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1029-1206 |
| Cow position: | chr15:8463345-8463164 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 1029-1207 |
| Cow position: | chr15:35739954-35740142 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1030-1164 |
| Cow position: | chr15:8442190-8442049 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1185 |
| Cow position: | chr15:6084900-6085060 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 1030-1200 |
| Cow position: | chr15:42847651-42847485 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 1030-1202 |
| Cow position: | chr15:29931106-29930935 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr15:48427005-48427187 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 139 |
| Conread position: | 1030-1203 |
| Cow position: | chr15:19127084-19127265 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 50, 84 |
| Conread position: | 1030-1205 |
| Cow position: | chr15:40991565-40991744 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 1030-1206 |
| Cow position: | chr15:3593386-3593202 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 1030-1207 |
| Cow position: | chr15:3581993-3581803 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1030-1207 |
| Cow position: | chr15:19404591-19404409 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr15:38818415-38818590 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 1030-1207 |
| Cow position: | chr15:51047150-51046967 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 1030-1208 |
| Cow position: | chr15:23753578-23753757 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 41, 149 |
| Conread position: | 1030-1209 |
| Cow position: | chr15:15786715-15786530 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 1030-1212 |
| Cow position: | chr15:8062394-8062577 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 1030-1212 |
| Cow position: | chr15:9786070-9786251 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 1030-1212 |
| Cow position: | chr15:12300691-12300501 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr15:13691387-13691566 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr15:24153313-24153129 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 112, 55 |
| Conread position: | 1030-1212 |
| Cow position: | chr15:26405165-26405351 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 1030-1212 |
| Cow position: | chr15:38634897-38634707 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr15:44282160-44281982 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 1030-1212 |
| Cow position: | chr15:49302049-49301855 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 1031-1193 |
| Cow position: | chr15:1233598-1233432 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1031-1193 |
| Cow position: | chr15:1240948-1240782 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1031-1200 |
| Cow position: | chr15:3539384-3539551 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 1031-1207 |
| Cow position: | chr15:41068986-41069161 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 1033-1202 |
| Cow position: | chr15:11675647-11675820 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 1033-1204 |
| Cow position: | chr15:31883094-31883271 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 48, 115 |
| Conread position: | 1037-1180 |
| Cow position: | chr15:22431301-22431159 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 1040-1212 |
| Cow position: | chr15:1687178-1687013 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1041-1209 |
| Cow position: | chr15:16455878-16455706 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 78 |
| Conread position: | 1043-1207 |
| Cow position: | chr15:14978492-14978663 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1044-1201 |
| Cow position: | chr15:7316513-7316671 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 134, 26 |
| Conread position: | 1046-1202 |
| Cow position: | chr15:30822605-30822765 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 1054-1212 |
| Cow position: | chr15:40290138-40290303 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 1055-1212 |
| Cow position: | chr15:21299001-21299159 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 1095-1207 |
| Cow position: | chr15:40270012-40269897 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1097-1198 |
| Cow position: | chr15:26528928-26529025 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.