Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1009-1212 |
| Cow position: | chr2:55377851-55377645 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 1028-1183 |
| Cow position: | chr2:66792554-66792405 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 1028-1202 |
| Cow position: | chr2:884153-883967 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1028-1205 |
| Cow position: | chr2:22132286-22132111 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 1028-1207 |
| Cow position: | chr2:21013965-21014141 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 91 |
| Conread position: | 1028-1212 |
| Cow position: | chr2:1138626-1138446 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 5, 106 |
| Conread position: | 1029-1206 |
| Cow position: | chr2:79212457-79212286 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 145, 41 |
| Conread position: | 1029-1207 |
| Cow position: | chr2:11706590-11706766 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 42, 144 |
| Conread position: | 1029-1207 |
| Cow position: | chr2:53302075-53301899 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 1029-1208 |
| Cow position: | chr2:15955718-15955543 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 1030-1162 |
| Cow position: | chr2:39819763-39819898 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1030-1165 |
| Cow position: | chr2:62503031-62503170 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 127 |
| Conread position: | 1030-1178 |
| Cow position: | chr2:32406039-32405887 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 1030-1191 |
| Cow position: | chr2:3628086-3627922 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 1030-1192 |
| Cow position: | chr2:17231452-17231287 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 1030-1200 |
| Cow position: | chr2:1437397-1437573 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1200 |
| Cow position: | chr2:58276703-58276873 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 1030-1201 |
| Cow position: | chr2:4125071-4124897 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 162 |
| Conread position: | 1030-1202 |
| Cow position: | chr2:7362086-7362263 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 129 |
| Conread position: | 1030-1202 |
| Cow position: | chr2:31827641-31827468 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 1030-1203 |
| Cow position: | chr2:26879488-26879666 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 131 |
| Conread position: | 1030-1203 |
| Cow position: | chr2:58320670-58320497 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 1030-1204 |
| Cow position: | chr2:42589936-42589765 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 1030-1204 |
| Cow position: | chr2:45470891-45471075 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1030-1204 |
| Cow position: | chr2:55678839-55679017 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 1030-1205 |
| Cow position: | chr2:1633454-1633273 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr2:10282750-10282935 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr2:51400968-51400791 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 117 |
| Conread position: | 1030-1205 |
| Cow position: | chr2:62222009-62221830 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 1030-1207 |
| Cow position: | chr2:5716457-5716640 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 129 |
| Conread position: | 1030-1207 |
| Cow position: | chr2:6053511-6053321 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr2:16416015-16416189 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr2:22718494-22718313 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 1030-1207 |
| Cow position: | chr2:50809403-50809576 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 1030-1207 |
| Cow position: | chr2:54468962-54468783 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 1030-1207 |
| Cow position: | chr2:69702128-69701945 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 1030-1207 |
| Cow position: | chr2:79240830-79240643 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 175 |
| Conread position: | 1030-1209 |
| Cow position: | chr2:54797102-54796919 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 1030-1210 |
| Cow position: | chr2:10362828-10362648 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 1030-1210 |
| Cow position: | chr2:61078554-61078727 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:13535854-13535671 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:15242899-15242712 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 41, 93 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:21003405-21003575 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:52625559-52625740 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:56827806-56827630 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:61909545-61909357 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:62064378-62064568 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:62563594-62563402 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:79075615-79075427 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:79939269-79939081 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 1030-1212 |
| Cow position: | chr2:85411481-85411295 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 1033-1194 |
| Cow position: | chr2:717088-716925 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 1033-1210 |
| Cow position: | chr2:9412375-9412552 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 1034-1204 |
| Cow position: | chr2:62389348-62389177 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 1038-1195 |
| Cow position: | chr2:10486125-10486289 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1038-1211 |
| Cow position: | chr2:2081928-2081753 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 1038-1212 |
| Cow position: | chr2:67252311-67252140 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 1039-1205 |
| Cow position: | chr2:56519054-56518878 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 166 |
| Conread position: | 1040-1212 |
| Cow position: | chr2:56017811-56017631 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1044-1205 |
| Cow position: | chr2:5761250-5761417 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1045-1212 |
| Cow position: | chr2:38383972-38384136 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 1045-1212 |
| Cow position: | chr2:51191867-51191693 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1045-1212 |
| Cow position: | chr2:67054377-67054203 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1055-1207 |
| Cow position: | chr2:59535730-59535884 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 138 |
| Conread position: | 1058-1205 |
| Cow position: | chr2:6176665-6176814 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 1082-1212 |
| Cow position: | chr2:50017494-50017364 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 93 |
| Conread position: | 1095-1209 |
| Cow position: | chr2:23634757-23634646 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.