Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1002-1205 |
| Cow position: | chr20:14505711-14505913 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 1013-1212 |
| Cow position: | chr20:11749941-11749738 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 1028-1201 |
| Cow position: | chr20:30703672-30703842 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 117 |
| Conread position: | 1028-1212 |
| Cow position: | chr20:29587686-29587876 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 6, 133 |
| Conread position: | 1029-1147 |
| Cow position: | chr20:14704062-14703938 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1029-1205 |
| Cow position: | chr20:39283693-39283878 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1030-1165 |
| Cow position: | chr20:14990400-14990262 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 1030-1193 |
| Cow position: | chr20:17547635-17547461 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1030-1198 |
| Cow position: | chr20:39199953-39199776 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1030-1201 |
| Cow position: | chr20:32347989-32348162 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 1030-1202 |
| Cow position: | chr20:7213090-7212911 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr20:7934078-7934254 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 1030-1202 |
| Cow position: | chr20:14403793-14403971 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr20:1374569-1374386 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr20:6446890-6446704 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr20:28021226-28021409 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1030-1206 |
| Cow position: | chr20:15536310-15536132 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 1030-1207 |
| Cow position: | chr20:3743961-3743790 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 1030-1207 |
| Cow position: | chr20:6869798-6869980 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 1030-1207 |
| Cow position: | chr20:16788553-16788737 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 1030-1207 |
| Cow position: | chr20:24979335-24979155 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 1030-1209 |
| Cow position: | chr20:26724915-26724735 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 1030-1212 |
| Cow position: | chr20:9036152-9035960 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr20:10575688-10575497 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr20:22694894-22694712 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 1032-1205 |
| Cow position: | chr20:4969662-4969490 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 1032-1212 |
| Cow position: | chr20:13023086-13022901 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1036-1208 |
| Cow position: | chr20:19865173-19864994 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 1037-1212 |
| Cow position: | chr20:13252929-13252749 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 1038-1168 |
| Cow position: | chr20:33661101-33661232 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 106 |
| Conread position: | 1042-1212 |
| Cow position: | chr20:27582258-27582088 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 1043-1203 |
| Cow position: | chr20:8038693-8038526 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1043-1207 |
| Cow position: | chr20:3501310-3501145 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 89 |
| Conread position: | 1045-1208 |
| Cow position: | chr20:8099534-8099704 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1062-1207 |
| Cow position: | chr20:9079206-9079054 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1065-1207 |
| Cow position: | chr20:17786087-17785939 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 1072-1207 |
| Cow position: | chr20:27407634-27407496 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1072-1210 |
| Cow position: | chr20:26474001-26474145 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.