Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1023-1207 |
| Cow position: | chr21:48616403-48616596 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 161 |
| Conread position: | 1026-1207 |
| Cow position: | chr21:18982443-18982618 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 1029-1205 |
| Cow position: | chr21:41147-41324 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 152 |
| Conread position: | 1029-1205 |
| Cow position: | chr21:31765777-31765962 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1030-1178 |
| Cow position: | chr21:32828267-32828120 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 1030-1197 |
| Cow position: | chr21:47868539-47868712 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 1030-1202 |
| Cow position: | chr21:3808473-3808655 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 1030-1202 |
| Cow position: | chr21:9202940-9203117 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 1030-1205 |
| Cow position: | chr21:8719181-8719000 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr21:26057940-26057755 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1030-1206 |
| Cow position: | chr21:5975003-5975182 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 97 |
| Conread position: | 1030-1207 |
| Cow position: | chr21:3649039-3648867 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 146, 14 |
| Conread position: | 1030-1207 |
| Cow position: | chr21:10110282-10110467 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr21:21180548-21180724 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 1030-1207 |
| Cow position: | chr21:22944892-22945072 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 1030-1207 |
| Cow position: | chr21:38678209-38678389 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 148, 33 |
| Conread position: | 1030-1207 |
| Cow position: | chr21:41430179-41430358 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 151 |
| Conread position: | 1030-1209 |
| Cow position: | chr21:6711837-6711649 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 103 |
| Conread position: | 1030-1209 |
| Cow position: | chr21:18769289-18769107 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 149, 54 |
| Conread position: | 1030-1211 |
| Cow position: | chr21:31919740-31919914 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 1030-1212 |
| Cow position: | chr21:18512340-18512531 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr21:28624876-28625055 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 1030-1212 |
| Cow position: | chr21:30644819-30644635 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 87 |
| Conread position: | 1031-1210 |
| Cow position: | chr21:31479255-31479435 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 1032-1209 |
| Cow position: | chr21:41458300-41458113 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1033-1208 |
| Cow position: | chr21:13160218-13160397 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 165 |
| Conread position: | 1034-1206 |
| Cow position: | chr21:13277617-13277790 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 48, 119 |
| Conread position: | 1038-1211 |
| Cow position: | chr21:33215734-33215913 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 167 |
| Conread position: | 1040-1207 |
| Cow position: | chr21:7646461-7646286 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 1041-1210 |
| Cow position: | chr21:20575308-20575136 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 1043-1207 |
| Cow position: | chr21:4419270-4419102 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 1052-1209 |
| Cow position: | chr21:29252762-29252598 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1072-1212 |
| Cow position: | chr21:25476484-25476632 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1095-1212 |
| Cow position: | chr21:2874534-2874419 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 21 |
Show alignments to all cow chromosomes.