Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1029-1207 |
| Cow position: | chr23:19913698-19913513 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 1030-1152 |
| Cow position: | chr23:39758705-39758583 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1030-1162 |
| Cow position: | chr23:1529897-1529761 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1030-1175 |
| Cow position: | chr23:34773698-34773560 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1030-1198 |
| Cow position: | chr23:35270616-35270786 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 1030-1202 |
| Cow position: | chr23:777870-777692 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 147 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr23:7373485-7373662 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 1030-1205 |
| Cow position: | chr23:35324069-35323896 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 1030-1206 |
| Cow position: | chr23:7289126-7288950 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 158 |
| Conread position: | 1030-1206 |
| Cow position: | chr23:14276823-14276650 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 1030-1206 |
| Cow position: | chr23:36217398-36217214 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 133 |
| Conread position: | 1030-1206 |
| Cow position: | chr23:37639430-37639254 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 1030-1207 |
| Cow position: | chr23:4602210-4602026 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 1030-1207 |
| Cow position: | chr23:40538999-40538822 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 114 |
| Conread position: | 1030-1207 |
| Cow position: | chr23:40920664-40920848 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1030-1210 |
| Cow position: | chr23:28831666-28831852 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 157 |
| Conread position: | 1030-1211 |
| Cow position: | chr23:19643179-19643367 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 1030-1211 |
| Cow position: | chr23:26184275-26184093 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 1030-1212 |
| Cow position: | chr23:12227345-12227171 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr23:18154621-18154809 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1031-1202 |
| Cow position: | chr23:35383928-35383739 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1033-1202 |
| Cow position: | chr23:25566279-25566443 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 1034-1189 |
| Cow position: | chr23:7287328-7287165 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1036-1211 |
| Cow position: | chr23:31026182-31025998 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1037-1175 |
| Cow position: | chr23:15289879-15290016 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 1037-1212 |
| Cow position: | chr23:32194692-32194516 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 1038-1201 |
| Cow position: | chr23:15058740-15058574 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 1038-1210 |
| Cow position: | chr23:19954219-19954038 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 171 |
| Conread position: | 1045-1207 |
| Cow position: | chr23:11093283-11093454 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1046-1178 |
| Cow position: | chr23:28384338-28384471 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 1046-1196 |
| Cow position: | chr23:28174428-28174278 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 1046-1210 |
| Cow position: | chr23:28010633-28010470 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 1094-1209 |
| Cow position: | chr23:19168803-19168920 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 62 |
| Conread position: | 1094-1212 |
| Cow position: | chr23:25000432-25000311 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.