Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1021-1203 |
| Cow position: | chr24:35556550-35556350 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1026-1206 |
| Cow position: | chr24:26255309-26255483 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 1026-1212 |
| Cow position: | chr24:10588206-10588022 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 154, 58 |
| Conread position: | 1029-1202 |
| Cow position: | chr24:23528244-23528066 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 1029-1202 |
| Cow position: | chr24:30017504-30017323 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 93 |
| Conread position: | 1029-1212 |
| Cow position: | chr24:5531864-5532055 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 1029-1212 |
| Cow position: | chr24:27229008-27228828 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 1030-1155 |
| Cow position: | chr24:17470073-17470201 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1170 |
| Cow position: | chr24:41242079-41242216 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 1030-1193 |
| Cow position: | chr24:36344642-36344457 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1194 |
| Cow position: | chr24:10460421-10460592 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 48, 97 |
| Conread position: | 1030-1198 |
| Cow position: | chr24:29070117-29069948 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 1030-1200 |
| Cow position: | chr24:16190502-16190678 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 1030-1200 |
| Cow position: | chr24:25049759-25049577 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 166 |
| Conread position: | 1030-1202 |
| Cow position: | chr24:43176562-43176740 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 1030-1204 |
| Cow position: | chr24:12046644-12046836 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1030-1204 |
| Cow position: | chr24:42507514-42507694 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 1030-1204 |
| Cow position: | chr24:42535481-42535661 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 1030-1205 |
| Cow position: | chr24:3530078-3530262 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr24:41009820-41010002 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 112 |
| Conread position: | 1030-1205 |
| Cow position: | chr24:42350104-42350282 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 1030-1206 |
| Cow position: | chr24:39556286-39556457 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 1030-1207 |
| Cow position: | chr24:7787550-7787736 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 1030-1207 |
| Cow position: | chr24:16162873-16163054 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 1030-1207 |
| Cow position: | chr24:31393744-31393559 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr24:44255950-44256137 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1030-1209 |
| Cow position: | chr24:26906285-26906471 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 133 |
| Conread position: | 1030-1210 |
| Cow position: | chr24:5873585-5873397 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 1030-1211 |
| Cow position: | chr24:27078806-27078982 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 147 |
| Conread position: | 1030-1212 |
| Cow position: | chr24:16101779-16101961 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 1030-1212 |
| Cow position: | chr24:23012895-23013077 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 1030-1212 |
| Cow position: | chr24:27884302-27884118 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 1031-1209 |
| Cow position: | chr24:17293001-17292815 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1033-1202 |
| Cow position: | chr24:30191706-30191874 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 1038-1200 |
| Cow position: | chr24:31438121-31437963 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 1038-1212 |
| Cow position: | chr24:22201736-22201547 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1040-1211 |
| Cow position: | chr24:23040756-23040917 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 1040-1212 |
| Cow position: | chr24:32441115-32441296 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 1046-1207 |
| Cow position: | chr24:16235249-16235424 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1046-1207 |
| Cow position: | chr24:31590000-31589840 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 1046-1211 |
| Cow position: | chr24:13783412-13783240 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1048-1178 |
| Cow position: | chr24:24777423-24777557 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1048-1212 |
| Cow position: | chr24:32418644-32418473 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1050-1202 |
| Cow position: | chr24:34721401-34721552 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 1076-1202 |
| Cow position: | chr24:38292027-38292158 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.