Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1027-1205 |
| Cow position: | chr28:21118291-21118108 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 6, 124 |
| Conread position: | 1027-1210 |
| Cow position: | chr28:25307050-25307238 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 166 |
| Conread position: | 1030-1178 |
| Cow position: | chr28:4404069-4404221 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1030-1185 |
| Cow position: | chr28:24330377-24330221 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 1030-1195 |
| Cow position: | chr28:28438652-28438825 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1030-1201 |
| Cow position: | chr28:3803256-3803425 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 41, 110 |
| Conread position: | 1030-1204 |
| Cow position: | chr28:978466-978282 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1204 |
| Cow position: | chr28:21941687-21941505 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr28:4375095-4374920 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 153 |
| Conread position: | 1030-1207 |
| Cow position: | chr28:22202222-22202405 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 1030-1207 |
| Cow position: | chr28:27111280-27111466 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1209 |
| Cow position: | chr28:2642026-2642212 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr28:7595290-7595103 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr28:10574199-10574022 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr28:11690129-11689947 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 1031-1205 |
| Cow position: | chr28:7411575-7411749 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 1031-1212 |
| Cow position: | chr28:10971480-10971675 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1032-1209 |
| Cow position: | chr28:32163407-32163221 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1034-1193 |
| Cow position: | chr28:3818266-3818096 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 1034-1209 |
| Cow position: | chr28:31415053-31414873 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1037-1201 |
| Cow position: | chr28:2577380-2577552 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1038-1210 |
| Cow position: | chr28:12865091-12865262 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 132 |
| Conread position: | 1038-1211 |
| Cow position: | chr28:1779736-1779915 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 40, 172 |
| Conread position: | 1039-1205 |
| Cow position: | chr28:15993650-15993820 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 1040-1204 |
| Cow position: | chr28:16419744-16419905 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 1043-1209 |
| Cow position: | chr28:7020325-7020156 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 1045-1172 |
| Cow position: | chr28:4047621-4047752 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1046-1209 |
| Cow position: | chr28:757183-757019 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 1074-1210 |
| Cow position: | chr28:22317533-22317664 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1097-1201 |
| Cow position: | chr28:16847270-16847168 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.