Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1025-1205 |
| Cow position: | chr29:6220173-6220359 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 1026-1207 |
| Cow position: | chr29:4335120-4334932 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1028-1152 |
| Cow position: | chr29:7971267-7971140 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 6, 85 |
| Conread position: | 1028-1202 |
| Cow position: | chr29:24327062-24326880 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1028-1209 |
| Cow position: | chr29:29138116-29137924 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1030-1171 |
| Cow position: | chr29:19601265-19601120 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1030-1185 |
| Cow position: | chr29:26250601-26250763 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 1030-1188 |
| Cow position: | chr29:34848979-34849138 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 1030-1191 |
| Cow position: | chr29:13608563-13608394 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1030-1194 |
| Cow position: | chr29:19751430-19751589 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 1030-1195 |
| Cow position: | chr29:27123286-27123112 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 1030-1199 |
| Cow position: | chr29:26224424-26224599 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 102 |
| Conread position: | 1030-1200 |
| Cow position: | chr29:25681070-25680898 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 1030-1202 |
| Cow position: | chr29:28653221-28653396 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 1030-1205 |
| Cow position: | chr29:22247528-22247345 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr29:30844831-30845014 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 111 |
| Conread position: | 1030-1207 |
| Cow position: | chr29:36100833-36101013 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 1030-1210 |
| Cow position: | chr29:16153612-16153795 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 138 |
| Conread position: | 1030-1212 |
| Cow position: | chr29:7828367-7828181 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1030-1212 |
| Cow position: | chr29:14190820-14190637 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 1032-1195 |
| Cow position: | chr29:24777242-24777067 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1034-1176 |
| Cow position: | chr29:7749791-7749644 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1046-1207 |
| Cow position: | chr29:34683176-34683004 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1054-1205 |
| Cow position: | chr29:18540920-18540761 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1055-1207 |
| Cow position: | chr29:27289940-27289784 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 98 |
| Conread position: | 1055-1211 |
| Cow position: | chr29:28950185-28950348 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1069-1207 |
| Cow position: | chr29:6556050-6555909 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1083-1212 |
| Cow position: | chr29:18287574-18287704 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 1094-1212 |
| Cow position: | chr29:23645220-23645100 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 109, 85 |
Show alignments to all cow chromosomes.