Cow genome map

Conread name: Ss1.1-Pig4-TMW8037M09.5

Conread position: 1028-1185
Cow position: chr5:18582914-18583076 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 1028-1192
Cow position: chr5:7780504-7780670 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 91

Conread position: 1028-1208
Cow position: chr5:11975015-11974827 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 144

Conread position: 1030-1156
Cow position: chr5:23414149-23414025 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 65

Conread position: 1030-1175
Cow position: chr5:17829500-17829348 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 1030-1182
Cow position: chr5:57783889-57784047 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1193
Cow position: chr5:33471141-33470977 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 144, 60

Conread position: 1030-1198
Cow position: chr5:52816431-52816256 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1200
Cow position: chr5:14136461-14136283 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 41, 98

Conread position: 1030-1200
Cow position: chr5:57147718-57147899 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1201
Cow position: chr5:51761080-51760909 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 16

Conread position: 1030-1202
Cow position: chr5:42045307-42045476 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 35

Conread position: 1030-1202
Cow position: chr5:51994014-51994187 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 89

Conread position: 1030-1204
Cow position: chr5:21517036-21516861 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 159

Conread position: 1030-1205
Cow position: chr5:29337084-29336898 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1030-1205
Cow position: chr5:42786994-42786815 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 111

Conread position: 1030-1206
Cow position: chr5:624713-624893 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1206
Cow position: chr5:14215845-14215663 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 40

Conread position: 1030-1206
Cow position: chr5:32139828-32139643 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1030-1206
Cow position: chr5:50227539-50227726 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 1030-1207
Cow position: chr5:4989698-4989881 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 1030-1207
Cow position: chr5:18002149-18001978 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 14

Conread position: 1030-1207
Cow position: chr5:30335969-30335787 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 87

Conread position: 1030-1207
Cow position: chr5:33283344-33283171 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 147

Conread position: 1030-1207
Cow position: chr5:36794521-36794353 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 1030-1207
Cow position: chr5:38970802-38970981 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 14

Conread position: 1030-1207
Cow position: chr5:57291014-57290833 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 118

Conread position: 1030-1207
Cow position: chr5:65053757-65053931 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 118

Conread position: 1030-1207
Cow position: chr5:70768659-70768846 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 9

Conread position: 1030-1208
Cow position: chr5:8232393-8232209 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 107, 59

Conread position: 1030-1208
Cow position: chr5:17507268-17507448 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 10

Conread position: 1030-1209
Cow position: chr5:51071420-51071600 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 55

Conread position: 1030-1210
Cow position: chr5:10095704-10095509 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 187

Conread position: 1030-1210
Cow position: chr5:40888722-40888538 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 60, 14

Conread position: 1030-1210
Cow position: chr5:49635177-49634992 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1210
Cow position: chr5:54717592-54717410 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 115

Conread position: 1030-1210
Cow position: chr5:56097009-56096820 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1212
Cow position: chr5:9675477-9675282 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1030-1212
Cow position: chr5:16211351-16211153 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1030-1212
Cow position: chr5:35990350-35990162 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 89

Conread position: 1030-1212
Cow position: chr5:41652078-41651891 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 59

Conread position: 1030-1212
Cow position: chr5:50770238-50770054 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 65

Conread position: 1031-1206
Cow position: chr5:31641304-31641495 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 1032-1207
Cow position: chr5:7659531-7659356 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 63

Conread position: 1033-1194
Cow position: chr5:6568007-6568170 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 60

Conread position: 1033-1207
Cow position: chr5:11955385-11955210 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 85

Conread position: 1034-1207
Cow position: chr5:66434707-66434886 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1034-1212
Cow position: chr5:44660068-44659893 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 46

Conread position: 1037-1210
Cow position: chr5:39327203-39327025 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 99

Conread position: 1038-1212
Cow position: chr5:61876143-61875963 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 1039-1202
Cow position: chr5:1751156-1751322 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 76

Conread position: 1039-1204
Cow position: chr5:15806737-15806904 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 21

Conread position: 1039-1207
Cow position: chr5:12799958-12799787 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1039-1212
Cow position: chr5:66352848-66353016 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 45

Conread position: 1040-1212
Cow position: chr5:4329367-4329546 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 77

Conread position: 1043-1202
Cow position: chr5:47083408-47083568 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 47

Conread position: 1045-1206
Cow position: chr5:32070003-32069834 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1046-1207
Cow position: chr5:32342292-32342144 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1050-1203
Cow position: chr5:55195548-55195709 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 1052-1201
Cow position: chr5:26509908-26509753 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 62

Conread position: 1053-1199
Cow position: chr5:41144845-41144998 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1053-1202
Cow position: chr5:70609123-70609280 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1054-1207
Cow position: chr5:18882966-18882804 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 1072-1207
Cow position: chr5:54408830-54408692 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 13

Conread position: 1080-1196
Cow position: chr5:9594717-9594835 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 0

Show alignments to all cow chromosomes.