Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8037M09.5
        

               Conread position:
               917-1207
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               45, 7
               

               Conread position:
               1012-1206
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               8, 141
               

               Conread position:
               1028-1195
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 151
               

               Conread position:
               1028-1202
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               1028-1206
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               5, 98
               

               Conread position:
               1028-1207
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 132
               

               Conread position:
               1028-1212
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               1028-1212
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               1029-1203
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               1029-1207
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 85
               

               Conread position:
               1030-1172
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               1030-1172
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1030-1197
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               154, 40
               

               Conread position:
               1030-1200
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               1030-1201
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 14
               

               Conread position:
               1030-1201
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 92
               

               Conread position:
               1030-1202
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1030-1202
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               1030-1202
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               1030-1205
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               1030-1206
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               1030-1206
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 83
               

               Conread position:
               1030-1206
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               1030-1206
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               144, 49
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               150
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               1030-1207
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               1030-1209
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               61, 103
               

               Conread position:
               1030-1209
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1030-1209
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               1030-1210
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               67, 87
               

               Conread position:
               1030-1210
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 117
               

               Conread position:
               1030-1211
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               50, 110
               

               Conread position:
               1030-1211
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               41, 86
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               40, 104
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               41, 68
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               41, 123
               

               Conread position:
               1030-1212
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1031-1193
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 88
               

               Conread position:
               1031-1208
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               1032-1154
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 97
               

               Conread position:
               1032-1162
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 99
               

               Conread position:
               1033-1198
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               1033-1203
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1034-1212
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1035-1207
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 139
               

               Conread position:
               1037-1206
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1040-1212
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               1040-1212
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1046-1202
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1046-1211
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 104
               

               Conread position:
               1046-1212
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 159
               

               Conread position:
               1049-1207
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1077-1200
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               21, 14
               

               Conread position:
               1079-1205
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1086-1208
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1089-1205
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               85, 0
               
Show alignments to all cow chromosomes.