Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8037M09.5 |
| Conread position: | 1026-1203 |
| Cow position: | chr8:20383884-20384068 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 1028-1204 |
| Cow position: | chr8:53887062-53887244 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1028-1207 |
| Cow position: | chr8:6586029-6586216 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 1028-1207 |
| Cow position: | chr8:53106460-53106290 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 1028-1209 |
| Cow position: | chr8:59472786-59472601 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 5, 65 |
| Conread position: | 1029-1203 |
| Cow position: | chr8:59822950-59822780 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 1030-1171 |
| Cow position: | chr8:19498058-19497906 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1176 |
| Cow position: | chr8:25050121-25050273 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1030-1178 |
| Cow position: | chr8:5185918-5186068 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 1030-1190 |
| Cow position: | chr8:26397743-26397580 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 1030-1192 |
| Cow position: | chr8:34396088-34396251 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 1030-1200 |
| Cow position: | chr8:17128780-17128612 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 1030-1200 |
| Cow position: | chr8:39097722-39097547 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1030-1201 |
| Cow position: | chr8:24766753-24766578 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 69 |
| Conread position: | 1030-1201 |
| Cow position: | chr8:51919819-51919644 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1030-1202 |
| Cow position: | chr8:26195048-26194877 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 31 |
| Conread position: | 1030-1202 |
| Cow position: | chr8:43398992-43398817 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 1030-1203 |
| Cow position: | chr8:18791320-18791146 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 1030-1205 |
| Cow position: | chr8:1506894-1506712 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr8:19362750-19362928 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 1030-1205 |
| Cow position: | chr8:26928846-26928664 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1030-1205 |
| Cow position: | chr8:43974628-43974453 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 150, 64 |
| Conread position: | 1030-1205 |
| Cow position: | chr8:51568797-51568614 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 108 |
| Conread position: | 1030-1206 |
| Cow position: | chr8:21585963-21586140 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 1030-1206 |
| Cow position: | chr8:26158522-26158702 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 39, 113 |
| Conread position: | 1030-1206 |
| Cow position: | chr8:31288865-31288687 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 9 |
| Conread position: | 1030-1207 |
| Cow position: | chr8:4999420-4999593 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1030-1207 |
| Cow position: | chr8:21945823-21946006 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr8:31495205-31495392 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1030-1207 |
| Cow position: | chr8:51588215-51588039 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 60, 111 |
| Conread position: | 1030-1209 |
| Cow position: | chr8:41411627-41411799 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 1030-1210 |
| Cow position: | chr8:38234044-38233849 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 67 |
| Conread position: | 1030-1211 |
| Cow position: | chr8:30473805-30473625 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 128 |
| Conread position: | 1030-1212 |
| Cow position: | chr8:3685668-3685852 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 83 |
| Conread position: | 1030-1212 |
| Cow position: | chr8:19865997-19865817 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 1030-1212 |
| Cow position: | chr8:42173854-42173668 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 1030-1212 |
| Cow position: | chr8:44127869-44127677 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 1030-1212 |
| Cow position: | chr8:49392937-49392753 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 39, 87 |
| Conread position: | 1030-1212 |
| Cow position: | chr8:51443166-51442983 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 144, 102 |
| Conread position: | 1030-1212 |
| Cow position: | chr8:58291310-58291116 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 35, 150 |
| Conread position: | 1030-1212 |
| Cow position: | chr8:59727981-59728168 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1030-1212 |
| Cow position: | chr8:61465692-61465872 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 144, 14 |
| Conread position: | 1031-1180 |
| Cow position: | chr8:24890335-24890480 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 10 |
| Conread position: | 1031-1209 |
| Cow position: | chr8:36608654-36608468 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 94 |
| Conread position: | 1031-1212 |
| Cow position: | chr8:5503748-5503930 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 120 |
| Conread position: | 1032-1207 |
| Cow position: | chr8:36107408-36107586 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1033-1212 |
| Cow position: | chr8:46279957-46280141 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 156 |
| Conread position: | 1034-1200 |
| Cow position: | chr8:61266476-61266648 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 1034-1201 |
| Cow position: | chr8:48084800-48084966 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 1034-1209 |
| Cow position: | chr8:28953101-28953287 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1035-1208 |
| Cow position: | chr8:40697590-40697407 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1036-1212 |
| Cow position: | chr8:18984496-18984316 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 159 |
| Conread position: | 1036-1212 |
| Cow position: | chr8:57354247-57354434 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1037-1212 |
| Cow position: | chr8:53718257-53718083 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 1038-1188 |
| Cow position: | chr8:52269665-52269506 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1040-1207 |
| Cow position: | chr8:29559637-29559812 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 1041-1212 |
| Cow position: | chr8:16648296-16648123 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 138, 112 |
| Conread position: | 1043-1192 |
| Cow position: | chr8:28383050-28383199 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 1046-1207 |
| Cow position: | chr8:42399291-42399120 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 95 |
| Conread position: | 1063-1208 |
| Cow position: | chr8:10862723-10862574 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 1073-1212 |
| Cow position: | chr8:24351585-24351440 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.