Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8038F24.3 |
| Conread position: | 464-661 |
| Cow position: | chr17:10016311-10016514 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 483-661 |
| Cow position: | chr17:30108486-30108667 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 485-658 |
| Cow position: | chr17:30977072-30977250 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 153 |
| Conread position: | 506-599 |
| Cow position: | chr17:25144137-25144045 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 506-652 |
| Cow position: | chr17:24767214-24767060 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 506-656 |
| Cow position: | chr17:31037303-31037145 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 81, 148 |
| Conread position: | 506-657 |
| Cow position: | chr17:40312780-40312932 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 506-658 |
| Cow position: | chr17:7711511-7711670 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 506-658 |
| Cow position: | chr17:23563722-23563578 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 506-658 |
| Cow position: | chr17:25800807-25800650 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 506-658 |
| Cow position: | chr17:32349141-32349297 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 506-661 |
| Cow position: | chr17:908814-908976 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 507-632 |
| Cow position: | chr17:5767982-5768107 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 16 |
| Conread position: | 507-642 |
| Cow position: | chr17:24757602-24757741 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 507-643 |
| Cow position: | chr17:44234325-44234464 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-644 |
| Cow position: | chr17:18473238-18473383 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 74, 60 |
| Conread position: | 507-646 |
| Cow position: | chr17:41429512-41429366 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 507-647 |
| Cow position: | chr17:5422994-5422855 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-647 |
| Cow position: | chr17:26575153-26574999 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 507-648 |
| Cow position: | chr17:1634417-1634269 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-649 |
| Cow position: | chr17:5027385-5027239 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 507-649 |
| Cow position: | chr17:12325690-12325545 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-649 |
| Cow position: | chr17:12536390-12536249 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 507-649 |
| Cow position: | chr17:20881734-20881590 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 131 |
| Conread position: | 507-649 |
| Cow position: | chr17:23101144-23100997 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 507-651 |
| Cow position: | chr17:45296486-45296633 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 48 |
| Conread position: | 507-652 |
| Cow position: | chr17:11148174-11148315 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-652 |
| Cow position: | chr17:12510899-12510757 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 507-652 |
| Cow position: | chr17:24773754-24773904 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-652 |
| Cow position: | chr17:25348443-25348595 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 143 |
| Conread position: | 507-655 |
| Cow position: | chr17:18934335-18934487 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 5 |
| Conread position: | 507-655 |
| Cow position: | chr17:29995361-29995204 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 507-655 |
| Cow position: | chr17:39606505-39606653 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 81, 128 |
| Conread position: | 507-656 |
| Cow position: | chr17:17044257-17044103 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 507-656 |
| Cow position: | chr17:32989551-32989705 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 507-656 |
| Cow position: | chr17:32993549-32993395 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 507-657 |
| Cow position: | chr17:6101325-6101467 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:1040820-1040962 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:3353958-3354103 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 27 |
| Conread position: | 507-658 |
| Cow position: | chr17:3577614-3577761 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:5693580-5693422 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:12215182-12215019 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 507-658 |
| Cow position: | chr17:15728548-15728702 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 507-658 |
| Cow position: | chr17:22051515-22051357 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:24111527-24111369 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:24786945-24786791 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 507-658 |
| Cow position: | chr17:25128278-25128120 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:26225102-26225262 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:28468198-28468358 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 507-658 |
| Cow position: | chr17:33155080-33154924 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:33288582-33288424 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:35457741-35457584 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 65 |
| Conread position: | 507-658 |
| Cow position: | chr17:36957978-36958122 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:37340962-37340797 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 507-658 |
| Cow position: | chr17:42150466-42150622 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 507-659 |
| Cow position: | chr17:24163111-24163269 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-659 |
| Cow position: | chr17:43859872-43860027 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 507-660 |
| Cow position: | chr17:5000513-5000365 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 507-660 |
| Cow position: | chr17:5372452-5372296 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 507-660 |
| Cow position: | chr17:24004447-24004609 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 507-661 |
| Cow position: | chr17:1025751-1025597 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 133 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 507-661 |
| Cow position: | chr17:2729838-2729680 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 507-661 |
| Cow position: | chr17:6318792-6318631 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:6423839-6423991 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:8815267-8815424 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 81 |
| Conread position: | 507-661 |
| Cow position: | chr17:9824744-9824904 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:13922558-13922719 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:17035024-17035183 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 507-661 |
| Cow position: | chr17:17059498-17059655 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:20072024-20071866 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 112 |
| Conread position: | 507-661 |
| Cow position: | chr17:20836166-20836327 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 75, 10 |
| Conread position: | 507-661 |
| Cow position: | chr17:21039632-21039793 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:21114879-21114718 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:21676965-21677128 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:21718922-21718760 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:24974016-24974180 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:25122169-25122011 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 507-661 |
| Cow position: | chr17:25473205-25473044 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:29084249-29084404 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 129 |
| Conread position: | 507-661 |
| Cow position: | chr17:30501740-30501576 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 141 |
| Conread position: | 507-661 |
| Cow position: | chr17:32333016-32332855 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 81, 133 |
| Conread position: | 507-661 |
| Cow position: | chr17:32419041-32418880 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:33933670-33933511 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 507-661 |
| Cow position: | chr17:43315213-43315053 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 507-663 |
| Cow position: | chr17:946432-946595 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 507-663 |
| Cow position: | chr17:33275675-33275520 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 507-668 |
| Cow position: | chr17:19544157-19543988 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 507-668 |
| Cow position: | chr17:33288404-33288247 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 507-672 |
| Cow position: | chr17:12963532-12963366 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 83, 50 |
| Conread position: | 507-672 |
| Cow position: | chr17:30728579-30728755 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-675 |
| Cow position: | chr17:24587699-24587874 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-675 |
| Cow position: | chr17:32471706-32471539 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 81, 149 |
| Conread position: | 507-675 |
| Cow position: | chr17:33653615-33653441 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 507-676 |
| Cow position: | chr17:25511320-25511495 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 507-676 |
| Cow position: | chr17:36330882-36330716 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 507-693 |
| Cow position: | chr17:18776112-18775921 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 63, 185 |
| Conread position: | 508-643 |
| Cow position: | chr17:40852046-40852187 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 508-648 |
| Cow position: | chr17:19471695-19471549 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 508-649 |
| Cow position: | chr17:12959182-12959327 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 508-649 |
| Cow position: | chr17:24862534-24862680 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 508-649 |
| Cow position: | chr17:29245519-29245659 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 508-658 |
| Cow position: | chr17:9932224-9932077 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 508-658 |
| Cow position: | chr17:10414574-10414727 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 508-658 |
| Cow position: | chr17:20022438-20022280 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 508-658 |
| Cow position: | chr17:24987282-24987436 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 508-658 |
| Cow position: | chr17:39759195-39759342 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 508-660 |
| Cow position: | chr17:7142937-7143093 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 508-661 |
| Cow position: | chr17:3364667-3364826 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 6 |
| Conread position: | 508-661 |
| Cow position: | chr17:12200869-12201029 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 508-661 |
| Cow position: | chr17:20905023-20904870 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 508-661 |
| Cow position: | chr17:34790988-34790828 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 508-661 |
| Cow position: | chr17:35276362-35276212 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 508-671 |
| Cow position: | chr17:32978857-32978690 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 508-676 |
| Cow position: | chr17:11056084-11055915 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 509-652 |
| Cow position: | chr17:38736515-38736659 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 509-656 |
| Cow position: | chr17:15333602-15333451 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 509-658 |
| Cow position: | chr17:7959258-7959413 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 509-658 |
| Cow position: | chr17:27429642-27429790 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 79, 102 |
| Conread position: | 509-660 |
| Cow position: | chr17:30713422-30713582 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 509-661 |
| Cow position: | chr17:6761771-6761617 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 80, 53 |
| Conread position: | 509-661 |
| Cow position: | chr17:12556646-12556787 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 509-661 |
| Cow position: | chr17:15103663-15103505 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 76, 135 |
| Conread position: | 509-661 |
| Cow position: | chr17:17782132-17782289 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 81, 132 |
| Conread position: | 509-661 |
| Cow position: | chr17:21003752-21003594 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 509-661 |
| Cow position: | chr17:25612167-25612324 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 509-661 |
| Cow position: | chr17:30513931-30513774 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 121 |
| Conread position: | 509-661 |
| Cow position: | chr17:33793240-33793389 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 118 |
| Conread position: | 509-661 |
| Cow position: | chr17:39963954-39964115 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 509-663 |
| Cow position: | chr17:33164742-33164581 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 509-668 |
| Cow position: | chr17:24497229-24497383 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 509-670 |
| Cow position: | chr17:1063251-1063415 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 509-670 |
| Cow position: | chr17:42259292-42259447 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 509-671 |
| Cow position: | chr17:9260535-9260364 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 509-672 |
| Cow position: | chr17:12019471-12019311 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 509-672 |
| Cow position: | chr17:40250501-40250658 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 509-689 |
| Cow position: | chr17:43717261-43717079 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 128 |
| Conread position: | 510-643 |
| Cow position: | chr17:25126428-25126563 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 510-655 |
| Cow position: | chr17:12946271-12946128 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 510-656 |
| Cow position: | chr17:36864708-36864855 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 510-657 |
| Cow position: | chr17:40412661-40412812 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 510-658 |
| Cow position: | chr17:25616327-25616479 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 510-658 |
| Cow position: | chr17:29356162-29356009 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 510-658 |
| Cow position: | chr17:40276818-40276970 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 77, 134 |
| Conread position: | 511-658 |
| Cow position: | chr17:1562708-1562557 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 511-668 |
| Cow position: | chr17:3467831-3467995 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 512-658 |
| Cow position: | chr17:11912423-11912271 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 513-642 |
| Cow position: | chr17:38483716-38483578 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 515-661 |
| Cow position: | chr17:27606600-27606750 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 71, 125 |
| Conread position: | 519-671 |
| Cow position: | chr17:27922632-27922475 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 20, 150 |
| Conread position: | 519-679 |
| Cow position: | chr17:42675940-42675785 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 523-660 |
| Cow position: | chr17:21312755-21312621 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 524-658 |
| Cow position: | chr17:29715113-29714980 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 527-656 |
| Cow position: | chr17:8809410-8809276 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 529-661 |
| Cow position: | chr17:24612747-24612882 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 530-668 |
| Cow position: | chr17:20783096-20782953 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 534-658 |
| Cow position: | chr17:22223817-22223948 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 534-658 |
| Cow position: | chr17:29282272-29282392 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 537-658 |
| Cow position: | chr17:13478491-13478370 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 548-661 |
| Cow position: | chr17:23358237-23358349 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 550-672 |
| Cow position: | chr17:20930420-20930551 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 551-691 |
| Cow position: | chr17:21478596-21478447 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.