Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8038F24.3 |
| Conread position: | 480-658 |
| Cow position: | chr26:14032410-14032240 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 491-664 |
| Cow position: | chr26:21319983-21320161 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 494-652 |
| Cow position: | chr26:26407752-26407587 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 506-658 |
| Cow position: | chr26:16796160-16796003 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 506-661 |
| Cow position: | chr26:5233024-5233180 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-593 |
| Cow position: | chr26:33392445-33392530 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-634 |
| Cow position: | chr26:33736503-33736370 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 507-647 |
| Cow position: | chr26:29897238-29897382 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 80, 133 |
| Conread position: | 507-649 |
| Cow position: | chr26:28423337-28423486 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-649 |
| Cow position: | chr26:32566062-32566210 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-652 |
| Cow position: | chr26:35704439-35704577 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 507-656 |
| Cow position: | chr26:23924901-23925051 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 74 |
| Conread position: | 507-657 |
| Cow position: | chr26:7687194-7687034 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 507-657 |
| Cow position: | chr26:14481503-14481358 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 507-657 |
| Cow position: | chr26:32955579-32955437 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 507-658 |
| Cow position: | chr26:647675-647513 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 507-658 |
| Cow position: | chr26:6487740-6487582 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-658 |
| Cow position: | chr26:10700852-10700694 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 112 |
| Conread position: | 507-658 |
| Cow position: | chr26:16585486-16585637 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-658 |
| Cow position: | chr26:20291641-20291483 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-658 |
| Cow position: | chr26:21636986-21636842 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 507-658 |
| Cow position: | chr26:22249426-22249280 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 507-658 |
| Cow position: | chr26:26888082-26887928 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 507-658 |
| Cow position: | chr26:28251207-28251363 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 82, 114 |
| Conread position: | 507-658 |
| Cow position: | chr26:29901010-29900851 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-658 |
| Cow position: | chr26:31973466-31973613 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-658 |
| Cow position: | chr26:34560120-34559962 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 507-660 |
| Cow position: | chr26:17057729-17057886 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 507-660 |
| Cow position: | chr26:32353669-32353510 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-661 |
| Cow position: | chr26:6514894-6515045 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 507-661 |
| Cow position: | chr26:8341547-8341696 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 507-661 |
| Cow position: | chr26:15132688-15132853 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 507-661 |
| Cow position: | chr26:18825232-18825071 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-661 |
| Cow position: | chr26:19591534-19591691 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 507-661 |
| Cow position: | chr26:20769902-20770063 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-661 |
| Cow position: | chr26:31888783-31888942 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 507-661 |
| Cow position: | chr26:33112335-33112173 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 507-661 |
| Cow position: | chr26:33202019-33201858 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 507-670 |
| Cow position: | chr26:9535569-9535735 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 507-670 |
| Cow position: | chr26:22892394-22892225 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 507-671 |
| Cow position: | chr26:5666099-5666263 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 507-671 |
| Cow position: | chr26:5836769-5836595 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 507-676 |
| Cow position: | chr26:19636343-19636517 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 507-676 |
| Cow position: | chr26:25407445-25407609 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 507-697 |
| Cow position: | chr26:32897818-32897635 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 508-643 |
| Cow position: | chr26:32503290-32503152 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 508-649 |
| Cow position: | chr26:34611129-34610986 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 508-656 |
| Cow position: | chr26:10502781-10502932 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 134 |
| Conread position: | 508-658 |
| Cow position: | chr26:12893375-12893220 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 47 |
| Conread position: | 508-658 |
| Cow position: | chr26:31382372-31382524 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 508-660 |
| Cow position: | chr26:26504787-26504941 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 130 |
| Conread position: | 508-661 |
| Cow position: | chr26:12807248-12807093 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 59 |
| Conread position: | 508-661 |
| Cow position: | chr26:33038171-33038013 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 508-669 |
| Cow position: | chr26:11875169-11875004 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 508-671 |
| Cow position: | chr26:21243147-21243310 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 151, 73 |
| Conread position: | 509-616 |
| Cow position: | chr26:27407402-27407514 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 509-649 |
| Cow position: | chr26:13802164-13802309 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 509-652 |
| Cow position: | chr26:4854598-4854747 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 509-652 |
| Cow position: | chr26:29889461-29889311 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 509-656 |
| Cow position: | chr26:9491975-9492126 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 509-658 |
| Cow position: | chr26:13018336-13018193 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 509-658 |
| Cow position: | chr26:34724822-34724665 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 509-660 |
| Cow position: | chr26:25526302-25526458 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 509-661 |
| Cow position: | chr26:9099479-9099321 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 509-661 |
| Cow position: | chr26:13862984-13862826 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 509-661 |
| Cow position: | chr26:31137414-31137253 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 509-669 |
| Cow position: | chr26:26950402-26950241 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 121 |
| Conread position: | 509-670 |
| Cow position: | chr26:16783879-16784048 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 509-691 |
| Cow position: | chr26:20825067-20824879 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 510-627 |
| Cow position: | chr26:7525152-7525030 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 510-656 |
| Cow position: | chr26:32517403-32517260 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 513-652 |
| Cow position: | chr26:22176699-22176835 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 513-658 |
| Cow position: | chr26:11800270-11800416 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 523-661 |
| Cow position: | chr26:12891904-12891759 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 524-658 |
| Cow position: | chr26:17465037-17464906 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 525-660 |
| Cow position: | chr26:13022531-13022674 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 531-664 |
| Cow position: | chr26:13800585-13800725 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 541-674 |
| Cow position: | chr26:12537455-12537318 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 35 |
Show alignments to all cow chromosomes.