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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8038F24.3
        

               
Conread position:
               
470-670
               

               
Cow position:
               
chr6:61109825-61110026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
478-661
               

               
Cow position:
               
chr6:38032904-38033094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
487-661
               

               
Cow position:
               
chr6:55646896-55646713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
487-679
               

               
Cow position:
               
chr6:63182341-63182539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
504-628
               

               
Cow position:
               
chr6:24008966-24008842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 77
               

               
Conread position:
               
505-643
               

               
Cow position:
               
chr6:9008541-9008408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
505-659
               

               
Cow position:
               
chr6:7291387-7291545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
506-656
               

               
Cow position:
               
chr6:38640306-38640462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
82, 135
               

               
Conread position:
               
506-657
               

               
Cow position:
               
chr6:38771353-38771503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
506-661
               

               
Cow position:
               
chr6:15300760-15300604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
506-661
               

               
Cow position:
               
chr6:16137698-16137531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
506-661
               

               
Cow position:
               
chr6:23696073-23696230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 131
               

               
Conread position:
               
507-626
               

               
Cow position:
               
chr6:16352280-16352162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
507-634
               

               
Cow position:
               
chr6:69145429-69145553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
507-639
               

               
Cow position:
               
chr6:5600787-5600656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
507-641
               

               
Cow position:
               
chr6:36920901-36920759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
507-647
               

               
Cow position:
               
chr6:1871124-1870975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
507-647
               

               
Cow position:
               
chr6:60740088-60740232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
507-648
               

               
Cow position:
               
chr6:13687738-13687593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
507-648
               

               
Cow position:
               
chr6:18117976-18117828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
507-648
               

               
Cow position:
               
chr6:34119280-34119140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
507-649
               

               
Cow position:
               
chr6:7119545-7119406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
507-649
               

               
Cow position:
               
chr6:63720274-63720416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
507-652
               

               
Cow position:
               
chr6:2078741-2078589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
507-652
               

               
Cow position:
               
chr6:10105905-10105756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
507-652
               

               
Cow position:
               
chr6:21231598-21231739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 76
               

               
Conread position:
               
507-652
               

               
Cow position:
               
chr6:53460493-53460344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
507-652
               

               
Cow position:
               
chr6:58173423-58173569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
507-653
               

               
Cow position:
               
chr6:54132889-54133039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
507-656
               

               
Cow position:
               
chr6:23938134-23938282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
507-656
               

               
Cow position:
               
chr6:29485156-29485314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
507-657
               

               
Cow position:
               
chr6:19292875-19293030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:2547329-2547494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:3351102-3351261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:4699781-4699938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:5820173-5820027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:8966171-8966321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:12623589-12623742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:17414371-17414217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 113
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:19259268-19259125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 81
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:19264425-19264268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 137
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:21293420-21293265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:21350959-21350798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:22985781-22985629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:23401918-23401762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:25615021-25614857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:26450386-26450532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:37994282-37994437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:39358267-39358110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:53546109-53546262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:60850774-60850932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:65871111-65871264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr6:69334236-69334083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:120319-120473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 108
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:143301-143142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:14383749-14383912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:24468322-24468163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:29210569-29210713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:30023959-30024113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:32287713-32287867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:35342106-35341951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:41657341-41657501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:43540176-43540026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:44194475-44194320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:46860093-46859935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 60
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:48097527-48097367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:50577594-50577751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:52478337-52478175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:53792395-53792242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:59603134-59602979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:60144124-60143963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:60273937-60273775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 150
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:67451297-67451136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
75, 137
               

               
Conread position:
               
507-661
               

               
Cow position:
               
chr6:68685627-68685776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
507-664
               

               
Cow position:
               
chr6:54490659-54490507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
507-664
               

               
Cow position:
               
chr6:58725444-58725606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
507-666
               

               
Cow position:
               
chr6:4323403-4323563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
507-669
               

               
Cow position:
               
chr6:45690536-45690375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
507-670
               

               
Cow position:
               
chr6:7128329-7128159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
507-670
               

               
Cow position:
               
chr6:32867144-32866976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
507-670
               

               
Cow position:
               
chr6:36537287-36537118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
507-671
               

               
Cow position:
               
chr6:34423385-34423214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
507-671
               

               
Cow position:
               
chr6:50504530-50504702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
507-672
               

               
Cow position:
               
chr6:21470355-21470185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
507-672
               

               
Cow position:
               
chr6:47574980-47575138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
507-673
               

               
Cow position:
               
chr6:8726751-8726925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
507-673
               

               
Cow position:
               
chr6:66570514-66570673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
507-674
               

               
Cow position:
               
chr6:21083467-21083293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 164
               

               
Conread position:
               
507-700
               

               
Cow position:
               
chr6:15172642-15172832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
180, 63
               

               
Conread position:
               
508-598
               

               
Cow position:
               
chr6:28900401-28900490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
508-642
               

               
Cow position:
               
chr6:21736815-21736685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
508-649
               

               
Cow position:
               
chr6:4383554-4383698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
508-649
               

               
Cow position:
               
chr6:12761354-12761504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
508-649
               

               
Cow position:
               
chr6:37395326-37395179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
508-652
               

               
Cow position:
               
chr6:64432013-64432160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
508-658
               

               
Cow position:
               
chr6:32121982-32122128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
508-658
               

               
Cow position:
               
chr6:46558132-46558287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
508-658
               

               
Cow position:
               
chr6:47520128-47520287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
508-658
               

               
Cow position:
               
chr6:49398545-49398396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
508-658
               

               
Cow position:
               
chr6:53024729-53024578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
75, 68
               

               
Conread position:
               
508-658
               

               
Cow position:
               
chr6:55417453-55417300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
508-659
               

               
Cow position:
               
chr6:7190044-7189897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
508-660
               

               
Cow position:
               
chr6:2014203-2014361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
508-661
               

               
Cow position:
               
chr6:694076-693909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
508-661
               

               
Cow position:
               
chr6:44544074-44543911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
508-674
               

               
Cow position:
               
chr6:15058451-15058623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
81, 153
               

               
Conread position:
               
508-682
               

               
Cow position:
               
chr6:33206811-33206986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
508-748
               

               
Cow position:
               
chr6:13367360-13367605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 59
               

               
Conread position:
               
509-638
               

               
Cow position:
               
chr6:26915404-26915541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
509-648
               

               
Cow position:
               
chr6:411140-410997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
509-649
               

               
Cow position:
               
chr6:40682590-40682444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
509-652
               

               
Cow position:
               
chr6:15305644-15305798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
509-652
               

               
Cow position:
               
chr6:23594020-23594162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
509-657
               

               
Cow position:
               
chr6:51581179-51581023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr6:5601775-5601933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr6:30825693-30825544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr6:31535493-31535340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr6:36196286-36196435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr6:36202894-36203054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr6:47884954-47884812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
509-658
               

               
Cow position:
               
chr6:49421716-49421563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
509-660
               

               
Cow position:
               
chr6:21061810-21061656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
509-661
               

               
Cow position:
               
chr6:17068572-17068419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
509-661
               

               
Cow position:
               
chr6:26155224-26155381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 149
               

               
Conread position:
               
509-661
               

               
Cow position:
               
chr6:34463512-34463354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
509-661
               

               
Cow position:
               
chr6:42034849-42035006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
509-661
               

               
Cow position:
               
chr6:62056690-62056847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
509-661
               

               
Cow position:
               
chr6:66839270-66839429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
509-664
               

               
Cow position:
               
chr6:25773143-25772980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
509-671
               

               
Cow position:
               
chr6:1941757-1941588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
509-671
               

               
Cow position:
               
chr6:9302644-9302478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 159
               

               
Conread position:
               
509-672
               

               
Cow position:
               
chr6:45921138-45920973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
509-673
               

               
Cow position:
               
chr6:5609371-5609194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
509-674
               

               
Cow position:
               
chr6:51933627-51933788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
509-684
               

               
Cow position:
               
chr6:28156086-28155914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
510-649
               

               
Cow position:
               
chr6:24905704-24905846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
510-652
               

               
Cow position:
               
chr6:2757861-2758009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
510-658
               

               
Cow position:
               
chr6:63168690-63168530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
511-656
               

               
Cow position:
               
chr6:46465899-46466049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
511-658
               

               
Cow position:
               
chr6:24031454-24031596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
511-658
               

               
Cow position:
               
chr6:45633908-45633762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
511-661
               

               
Cow position:
               
chr6:16090981-16091133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
512-641
               

               
Cow position:
               
chr6:17412488-17412357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
512-649
               

               
Cow position:
               
chr6:28999860-28999733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
512-658
               

               
Cow position:
               
chr6:21175416-21175567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
512-674
               

               
Cow position:
               
chr6:19225305-19225143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
513-661
               

               
Cow position:
               
chr6:41226753-41226611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
514-663
               

               
Cow position:
               
chr6:32006374-32006218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
514-669
               

               
Cow position:
               
chr6:54406719-54406561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 131
               

               
Conread position:
               
517-661
               

               
Cow position:
               
chr6:10612925-10613066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
519-661
               

               
Cow position:
               
chr6:43770813-43770666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
520-642
               

               
Cow position:
               
chr6:53235566-53235436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
520-658
               

               
Cow position:
               
chr6:6547421-6547281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 90
               

               
Conread position:
               
523-661
               

               
Cow position:
               
chr6:13653433-13653582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
523-661
               

               
Cow position:
               
chr6:67615063-67614930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
524-670
               

               
Cow position:
               
chr6:21347060-21346907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
524-670
               

               
Cow position:
               
chr6:47673057-47672907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
525-658
               

               
Cow position:
               
chr6:66058616-66058476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
527-691
               

               
Cow position:
               
chr6:57320504-57320332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
531-675
               

               
Cow position:
               
chr6:23532752-23532895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
534-658
               

               
Cow position:
               
chr6:62849026-62849154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
534-675
               

               
Cow position:
               
chr6:11262847-11262990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
535-658
               

               
Cow position:
               
chr6:15266258-15266134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
535-661
               

               
Cow position:
               
chr6:67451552-67451428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
539-688
               

               
Cow position:
               
chr6:8094172-8094023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
547-658
               

               
Cow position:
               
chr6:60673948-60674064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               
Show alignments to all cow chromosomes.