Cow genome map

Conread name: Ss1.1-Pig4-TMW8038F24.3

Conread position: 470-661
Cow position: chrX:2523657-2523475 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 502-672
Cow position: chrX:29682055-29681882 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 65

Conread position: 506-649
Cow position: chrX:29467718-29467569 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 506-652
Cow position: chrX:47061456-47061602 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 140

Conread position: 506-658
Cow position: chrX:4750272-4750116 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 52

Conread position: 506-658
Cow position: chrX:42927764-42927608 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 82, 120

Conread position: 506-661
Cow position: chrX:5118438-5118273 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 506-695
Cow position: chrX:20583726-20583921 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 80, 134

Conread position: 507-598
Cow position: chrX:31312090-31312180 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 507-627
Cow position: chrX:4515752-4515879 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 30

Conread position: 507-627
Cow position: chrX:34532581-34532709 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 507-632
Cow position: chrX:41862424-41862556 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 507-633
Cow position: chrX:5919553-5919689 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 507-646
Cow position: chrX:35542948-35543094 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 507-647
Cow position: chrX:40035379-40035228 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 507-648
Cow position: chrX:46070109-46069973 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 77

Conread position: 507-649
Cow position: chrX:9650963-9650814 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 507-649
Cow position: chrX:19469445-19469302 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 507-649
Cow position: chrX:34837003-34836859 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 124
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 77, 131

Conread position: 507-649
Cow position: chrX:43115211-43115362 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 507-649
Cow position: chrX:44094300-44094158 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 80, 119

Conread position: 507-652
Cow position: chrX:11589306-11589151 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 507-652
Cow position: chrX:38560620-38560766 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 507-652
Cow position: chrX:41192765-41192905 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 507-652
Cow position: chrX:45382984-45382845 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 507-655
Cow position: chrX:20151917-20152067 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 507-656
Cow position: chrX:11326036-11325888 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 507-656
Cow position: chrX:31480032-31480186 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 14

Conread position: 507-656
Cow position: chrX:40685267-40685109 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 507-657
Cow position: chrX:17525806-17525656 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 126
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 81, 128

Conread position: 507-657
Cow position: chrX:31827783-31827634 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 112

Conread position: 507-658
Cow position: chrX:1499726-1499876 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 82

Conread position: 507-658
Cow position: chrX:8869341-8869182 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 507-658
Cow position: chrX:17795042-17795201 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 149

Conread position: 507-658
Cow position: chrX:18812170-18812318 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 507-658
Cow position: chrX:19394614-19394777 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 507-658
Cow position: chrX:22074857-22075017 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 123

Conread position: 507-658
Cow position: chrX:23497630-23497475 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 69

Conread position: 507-658
Cow position: chrX:27145665-27145821 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 507-658
Cow position: chrX:29601767-29601607 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 507-658
Cow position: chrX:34314085-34314243 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 507-658
Cow position: chrX:35382975-35382820 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 20

Conread position: 507-658
Cow position: chrX:37072450-37072608 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 507-658
Cow position: chrX:37781048-37780890 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 134

Conread position: 507-658
Cow position: chrX:38218775-38218935 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 507-658
Cow position: chrX:40116543-40116690 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 507-660
Cow position: chrX:20340582-20340434 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 507-661
Cow position: chrX:12811-12968 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 36

Conread position: 507-661
Cow position: chrX:2936018-2936178 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 507-661
Cow position: chrX:4152970-4152819 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 127
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 507-661
Cow position: chrX:4289505-4289659 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 507-661
Cow position: chrX:5026317-5026476 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 507-661
Cow position: chrX:11656142-11656303 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 135
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 507-661
Cow position: chrX:11762940-11762786 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 507-661
Cow position: chrX:11938872-11938728 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 507-661
Cow position: chrX:12979773-12979610 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 507-661
Cow position: chrX:13177415-13177259 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 134
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 80, 131

Conread position: 507-661
Cow position: chrX:20584389-20584537 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 130
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 507-661
Cow position: chrX:20666840-20666677 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 30

Conread position: 507-661
Cow position: chrX:24054738-24054886 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 80

Conread position: 507-661
Cow position: chrX:27431857-27431699 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 72, 133

Conread position: 507-661
Cow position: chrX:28940303-28940469 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 507-661
Cow position: chrX:32866936-32867095 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 507-661
Cow position: chrX:34377003-34377164 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 507-661
Cow position: chrX:34411907-34412073 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 507-661
Cow position: chrX:34792250-34792098 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 24

Conread position: 507-661
Cow position: chrX:38094459-38094301 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 79, 130

Conread position: 507-661
Cow position: chrX:39352847-39352997 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 507-661
Cow position: chrX:41453363-41453524 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 507-661
Cow position: chrX:41871128-41871282 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 80, 105

Conread position: 507-661
Cow position: chrX:42381051-42380887 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 137

Conread position: 507-661
Cow position: chrX:42479894-42480052 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 137

Conread position: 507-662
Cow position: chrX:4467028-4467177 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 129
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 74, 0

Conread position: 507-662
Cow position: chrX:41526467-41526308 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 81, 27

Conread position: 507-663
Cow position: chrX:1466223-1466390 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 507-663
Cow position: chrX:12437209-12437056 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 507-663
Cow position: chrX:21986230-21986074 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 507-663
Cow position: chrX:22392923-22392761 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 79, 63

Conread position: 507-664
Cow position: chrX:34991425-34991589 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 507-670
Cow position: chrX:4399187-4399352 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 16

Conread position: 507-670
Cow position: chrX:27668897-27668728 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 119

Conread position: 507-672
Cow position: chrX:22115256-22115078 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 507-672
Cow position: chrX:39290420-39290591 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 507-674
Cow position: chrX:20957299-20957475 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 79, 158

Conread position: 507-675
Cow position: chrX:38549508-38549686 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 507-677
Cow position: chrX:8925760-8925921 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 507-708
Cow position: chrX:31436535-31436739 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 75, 157

Conread position: 508-648
Cow position: chrX:32747794-32747934 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 128

Conread position: 508-648
Cow position: chrX:35885665-35885520 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 508-649
Cow position: chrX:30824051-30824198 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 508-652
Cow position: chrX:3806744-3806894 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 508-652
Cow position: chrX:32208760-32208611 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 29

Conread position: 508-652
Cow position: chrX:34504987-34504837 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 19, 55

Conread position: 508-652
Cow position: chrX:41810106-41809959 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 508-654
Cow position: chrX:16762833-16762986 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 62

Conread position: 508-658
Cow position: chrX:1088081-1087926 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 508-658
Cow position: chrX:8326966-8327127 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 508-658
Cow position: chrX:11653832-11653989 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 508-658
Cow position: chrX:17956753-17956911 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 16

Conread position: 508-658
Cow position: chrX:27074989-27074829 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 508-658
Cow position: chrX:31442767-31442617 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 508-658
Cow position: chrX:42875274-42875431 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 508-658
Cow position: chrX:46072755-46072608 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 508-661
Cow position: chrX:161474-161625 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 63

Conread position: 508-661
Cow position: chrX:2551153-2551302 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 83

Conread position: 508-661
Cow position: chrX:9252101-9251938 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 508-661
Cow position: chrX:16556155-16555998 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 40

Conread position: 508-661
Cow position: chrX:23471804-23471643 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 508-661
Cow position: chrX:38964170-38964322 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 59

Conread position: 508-661
Cow position: chrX:41858820-41858659 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 508-661
Cow position: chrX:42893988-42894147 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 508-661
Cow position: chrX:45110718-45110876 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 508-663
Cow position: chrX:46068697-46068537 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 146

Conread position: 508-702
Cow position: chrX:42432446-42432248 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 16

Conread position: 508-710
Cow position: chrX:35268923-35269129 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 130

Conread position: 509-634
Cow position: chrX:918652-918528 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 12

Conread position: 509-635
Cow position: chrX:14275680-14275549 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 509-643
Cow position: chrX:44798986-44798844 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 509-649
Cow position: chrX:25286661-25286509 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 509-649
Cow position: chrX:27170802-27170949 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 509-652
Cow position: chrX:27306517-27306655 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 122
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 509-656
Cow position: chrX:11529406-11529558 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 509-656
Cow position: chrX:38642312-38642462 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 120

Conread position: 509-656
Cow position: chrX:40567684-40567825 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 509-658
Cow position: chrX:6544317-6544467 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 509-658
Cow position: chrX:23088915-23089057 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 509-658
Cow position: chrX:23136803-23136953 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 125

Conread position: 509-658
Cow position: chrX:33855156-33855004 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 30

Conread position: 509-658
Cow position: chrX:40556396-40556241 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 509-658
Cow position: chrX:45429959-45429809 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 147

Conread position: 509-658
Cow position: chrX:47855044-47855199 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 76, 28

Conread position: 509-661
Cow position: chrX:5487876-5487723 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 509-661
Cow position: chrX:12972746-12972903 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 509-661
Cow position: chrX:16984704-16984860 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 49

Conread position: 509-661
Cow position: chrX:23359051-23358892 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 509-661
Cow position: chrX:25232060-25232207 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 509-661
Cow position: chrX:29050310-29050467 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 122

Conread position: 509-661
Cow position: chrX:39642559-39642403 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 81, 36

Conread position: 509-661
Cow position: chrX:41010961-41011115 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 126

Conread position: 509-661
Cow position: chrX:42331347-42331498 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 128

Conread position: 509-661
Cow position: chrX:46909878-46910033 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 127

Conread position: 509-668
Cow position: chrX:9201611-9201775 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 509-668
Cow position: chrX:16836226-16836062 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 509-670
Cow position: chrX:7722051-7722208 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 509-670
Cow position: chrX:27261255-27261424 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 137

Conread position: 509-672
Cow position: chrX:6559385-6559219 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 76

Conread position: 509-673
Cow position: chrX:1101620-1101787 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 67, 58

Conread position: 509-703
Cow position: chrX:10252137-10251933 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 510-658
Cow position: chrX:3494981-3494828 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 24

Conread position: 510-658
Cow position: chrX:15007085-15006937 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 65

Conread position: 510-658
Cow position: chrX:24749149-24749309 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 510-670
Cow position: chrX:45502210-45502369 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 101

Conread position: 511-661
Cow position: chrX:14135743-14135900 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 512-635
Cow position: chrX:24633761-24633893 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 513-658
Cow position: chrX:31744937-31744793 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 75

Conread position: 513-661
Cow position: chrX:41215389-41215548 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 516-649
Cow position: chrX:39419644-39419508 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 516-658
Cow position: chrX:4486954-4486802 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 516-659
Cow position: chrX:25420401-25420547 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 520-664
Cow position: chrX:43059177-43059028 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 523-661
Cow position: chrX:1571512-1571371 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 524-649
Cow position: chrX:35029848-35029722 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 524-652
Cow position: chrX:14973668-14973541 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 525-661
Cow position: chrX:31279845-31279702 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 528-658
Cow position: chrX:43028314-43028451 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 530-661
Cow position: chrX:37176958-37177092 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 106

Conread position: 537-650
Cow position: chrX:46291236-46291355 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 30

Conread position: 537-661
Cow position: chrX:41959845-41959972 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 539-657
Cow position: chrX:38727044-38726923 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 9

Conread position: 540-672
Cow position: chrX:42216537-42216399 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 128

Conread position: 548-658
Cow position: chrX:13892919-13893028 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.