Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8038I22.3.5 |
| Conread position: | 1-2122 |
| Cow position: | chr4:14174386-14172247 (view UCSC Genome Browser custom track) |
| Alignm length: | 2143 |
| Alignm identity: | 1788 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1734, 1786 |
| Conread position: | 9-174 |
| Cow position: | chr4:66284290-66284125 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 172-334 |
| Cow position: | chr4:66280664-66280502 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 140 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-468 |
| Cow position: | chr4:66279664-66279531 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 130 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 465-576 |
| Cow position: | chr4:66270691-66270580 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 574-689 |
| Cow position: | chr4:66270502-66270387 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 731-863 |
| Cow position: | chr4:66268749-66268617 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 862-981 |
| Cow position: | chr4:66267388-66267269 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 114 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1057-1616 |
| Cow position: | chr4:66265416-66264857 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1189-1284 |
| Cow position: | chr4:66264080-66263985 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1326-1421 |
| Cow position: | chr4:66260359-66260263 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1415-1521 |
| Cow position: | chr4:66259754-66259648 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1519-1634 |
| Cow position: | chr4:66259076-66258961 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 111 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1633-2196 |
| Cow position: | chr4:66258404-66257842 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 87 |
Show alignments to all cow chromosomes.