Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8038O11.5.5
        

               Conread position:
               45-149
               

               Cow position:
               chr21:29451138-29451034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-260
               

               Cow position:
               chr21:29450800-29450688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               261-382
               

               Cow position:
               chr21:29447615-29447494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               383-512
               

               Cow position:
               chr21:29445581-29445452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               122
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               507-603
               

               Cow position:
               chr21:29438355-29438259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               601-710
               

               Cow position:
               chr21:29435997-29435888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               109
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               704-786
               

               Cow position:
               chr21:29432339-29432257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               81
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               825-912
               

               Cow position:
               chr21:29423294-29423207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               910-1083
               

               Cow position:
               chr21:29419505-29419331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               1070-1158
               

               Cow position:
               chr21:29419263-29419175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1156-1962
               

               Cow position:
               chr21:29414868-29414066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               826
               

               Alignm identity:
               718
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 115
               

               Conread position:
               2115-2432
               

               Cow position:
               chr21:29414066-29413768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               
Show alignments to all cow chromosomes.