Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039A22.3 |
| Conread position: | 523-663 |
| Cow position: | chr10:2493718-2493577 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 5 |
| Conread position: | 528-674 |
| Cow position: | chr10:9087432-9087583 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 528-682 |
| Cow position: | chr10:55844188-55844030 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 528-698 |
| Cow position: | chr10:13787737-13787559 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 529-695 |
| Cow position: | chr10:65710630-65710803 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 530-695 |
| Cow position: | chr10:47342344-47342513 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 535-698 |
| Cow position: | chr10:6338866-6339030 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 106 |
| Conread position: | 536-669 |
| Cow position: | chr10:69619577-69619710 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-678 |
| Cow position: | chr10:46741934-46742078 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 536-681 |
| Cow position: | chr10:5110529-5110679 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 536-682 |
| Cow position: | chr10:17963095-17963240 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 536-682 |
| Cow position: | chr10:28252152-28252007 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 536-686 |
| Cow position: | chr10:31630785-31630632 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 116 |
| Conread position: | 536-692 |
| Cow position: | chr10:52234163-52234320 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 536-694 |
| Cow position: | chr10:804339-804498 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 536-695 |
| Cow position: | chr10:39511431-39511586 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 536-695 |
| Cow position: | chr10:62625932-62625772 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 536-697 |
| Cow position: | chr10:17229810-17229646 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 536-697 |
| Cow position: | chr10:37102665-37102507 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 536-698 |
| Cow position: | chr10:8282173-8282342 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 536-698 |
| Cow position: | chr10:18322050-18322207 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 536-698 |
| Cow position: | chr10:27263019-27262853 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 536-698 |
| Cow position: | chr10:57754212-57754372 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 536-734 |
| Cow position: | chr10:45348667-45348859 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 537-695 |
| Cow position: | chr10:28560191-28560031 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 537-698 |
| Cow position: | chr10:2272648-2272487 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 538-663 |
| Cow position: | chr10:52050826-52050698 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 538-671 |
| Cow position: | chr10:52747951-52748090 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 538-693 |
| Cow position: | chr10:66960606-66960448 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 538-698 |
| Cow position: | chr10:32617608-32617767 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 538-744 |
| Cow position: | chr10:66782360-66782569 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 61 |
| Conread position: | 539-674 |
| Cow position: | chr10:8079435-8079295 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 539-695 |
| Cow position: | chr10:39482879-39483035 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 543-692 |
| Cow position: | chr10:41142562-41142713 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 543-695 |
| Cow position: | chr10:26686352-26686201 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 543-695 |
| Cow position: | chr10:49554125-49554277 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 543-695 |
| Cow position: | chr10:54309605-54309761 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 548-690 |
| Cow position: | chr10:26812285-26812434 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 553-681 |
| Cow position: | chr10:62846604-62846734 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 554-695 |
| Cow position: | chr10:33882213-33882077 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 560-695 |
| Cow position: | chr10:11445221-11445358 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 561-698 |
| Cow position: | chr10:1204516-1204647 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 579-697 |
| Cow position: | chr10:30400526-30400646 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 579-698 |
| Cow position: | chr10:9465186-9465303 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.