Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039A22.3 |
| Conread position: | 528-722 |
| Cow position: | chr12:26186600-26186790 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 536-636 |
| Cow position: | chr12:3131044-3131144 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 536-664 |
| Cow position: | chr12:4180330-4180196 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 536-685 |
| Cow position: | chr12:19215783-19215936 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 536-690 |
| Cow position: | chr12:7163608-7163759 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 536-697 |
| Cow position: | chr12:13219076-13219238 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 536-698 |
| Cow position: | chr12:6973594-6973757 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 121 |
| Conread position: | 536-698 |
| Cow position: | chr12:33250145-33250311 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 536-698 |
| Cow position: | chr12:35772725-35772566 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 536-698 |
| Cow position: | chr12:41918267-41918432 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 536-698 |
| Cow position: | chr12:45459950-45460113 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 142 |
| Conread position: | 536-698 |
| Cow position: | chr12:45730729-45730892 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 536-718 |
| Cow position: | chr12:21120366-21120185 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 538-682 |
| Cow position: | chr12:29466270-29466417 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 538-698 |
| Cow position: | chr12:912293-912454 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 538-698 |
| Cow position: | chr12:5602117-5602286 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 538-698 |
| Cow position: | chr12:9526241-9526081 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 149 |
| Conread position: | 543-697 |
| Cow position: | chr12:40879833-40879983 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 543-698 |
| Cow position: | chr12:10156630-10156470 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 548-690 |
| Cow position: | chr12:28227452-28227599 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 549-698 |
| Cow position: | chr12:14679930-14679780 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 550-742 |
| Cow position: | chr12:43484365-43484558 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 558-694 |
| Cow position: | chr12:13947973-13947832 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 560-673 |
| Cow position: | chr12:26206595-26206480 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 560-674 |
| Cow position: | chr12:16513485-16513367 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 90 |
| Conread position: | 560-698 |
| Cow position: | chr12:39956960-39956821 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 574-698 |
| Cow position: | chr12:29772822-29772699 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 579-696 |
| Cow position: | chr12:41874039-41873921 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 600-698 |
| Cow position: | chr12:9578533-9578435 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.