Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039A22.3 |
| Conread position: | 506-682 |
| Cow position: | chr15:41192660-41192836 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 518-695 |
| Cow position: | chr15:11649728-11649912 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 148 |
| Conread position: | 518-695 |
| Cow position: | chr15:27395184-27395007 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 522-695 |
| Cow position: | chr15:47771071-47771249 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 48 |
| Conread position: | 524-695 |
| Cow position: | chr15:39035922-39035741 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 535-698 |
| Cow position: | chr15:33154441-33154599 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 536-666 |
| Cow position: | chr15:29600970-29600837 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 536-672 |
| Cow position: | chr15:45712169-45712305 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 81 |
| Conread position: | 536-682 |
| Cow position: | chr15:38540484-38540336 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 71 |
| Conread position: | 536-695 |
| Cow position: | chr15:36363135-36362982 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 536-697 |
| Cow position: | chr15:50202179-50202013 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 536-698 |
| Cow position: | chr15:9741024-9741187 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 151 |
| Conread position: | 536-698 |
| Cow position: | chr15:18664809-18664973 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 71, 156 |
| Conread position: | 536-698 |
| Cow position: | chr15:21367808-21367655 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 68, 8 |
| Conread position: | 536-698 |
| Cow position: | chr15:31408863-31409026 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 536-698 |
| Cow position: | chr15:40300738-40300570 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 537-682 |
| Cow position: | chr15:50251984-50252126 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 538-695 |
| Cow position: | chr15:18044170-18044011 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 538-695 |
| Cow position: | chr15:35219694-35219850 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 542-693 |
| Cow position: | chr15:40347763-40347913 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 543-677 |
| Cow position: | chr15:23933448-23933312 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 543-698 |
| Cow position: | chr15:19783059-19782913 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 544-661 |
| Cow position: | chr15:23776833-23776714 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 544-695 |
| Cow position: | chr15:26444712-26444565 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 548-694 |
| Cow position: | chr15:19926741-19926889 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 548-694 |
| Cow position: | chr15:48870414-48870265 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 560-682 |
| Cow position: | chr15:47443899-47444020 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 564-695 |
| Cow position: | chr15:14832116-14832250 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 568-698 |
| Cow position: | chr15:34715576-34715444 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 119 |
Show alignments to all cow chromosomes.