Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039A22.3 |
| Conread position: | 522-693 |
| Cow position: | chr18:7661904-7661725 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 535-674 |
| Cow position: | chr18:26458605-26458744 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 536-655 |
| Cow position: | chr18:16198360-16198487 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 536-682 |
| Cow position: | chr18:19304782-19304628 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 536-682 |
| Cow position: | chr18:29784484-29784633 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 536-695 |
| Cow position: | chr18:8031253-8031416 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 536-695 |
| Cow position: | chr18:15860412-15860249 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 536-695 |
| Cow position: | chr18:23382190-23382345 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 536-695 |
| Cow position: | chr18:23724435-23724275 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 66, 120 |
| Conread position: | 536-695 |
| Cow position: | chr18:26509999-26509840 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-695 |
| Cow position: | chr18:29611935-29611769 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 536-695 |
| Cow position: | chr18:42562385-42562221 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 129 |
| Conread position: | 536-695 |
| Cow position: | chr18:51555702-51555541 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 536-696 |
| Cow position: | chr18:22855218-22855379 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 536-696 |
| Cow position: | chr18:29657171-29657012 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 116 |
| Conread position: | 537-695 |
| Cow position: | chr18:47930746-47930906 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 99 |
| Conread position: | 537-695 |
| Cow position: | chr18:53284435-53284279 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 538-695 |
| Cow position: | chr18:9138162-9138005 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 87, 119 |
| Conread position: | 538-695 |
| Cow position: | chr18:29211165-29211002 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 538-698 |
| Cow position: | chr18:13354028-13353871 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 538-698 |
| Cow position: | chr18:18792193-18792033 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 541-693 |
| Cow position: | chr18:15849517-15849365 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-683 |
| Cow position: | chr18:49887503-49887353 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 543-695 |
| Cow position: | chr18:17816093-17816245 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-698 |
| Cow position: | chr18:41934817-41934971 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 543-742 |
| Cow position: | chr18:17765612-17765408 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 170 |
| Conread position: | 547-698 |
| Cow position: | chr18:16447306-16447461 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 50, 29 |
| Conread position: | 555-698 |
| Cow position: | chr18:21248389-21248534 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.