Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039A22.3 |
| Conread position: | 518-696 |
| Cow position: | chr28:34404160-34404335 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 531-696 |
| Cow position: | chr28:31839977-31839812 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 6 |
| Conread position: | 535-695 |
| Cow position: | chr28:23181040-23181197 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 31 |
| Conread position: | 536-662 |
| Cow position: | chr28:25016255-25016380 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 536-667 |
| Cow position: | chr28:28391102-28390967 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 536-681 |
| Cow position: | chr28:2293460-2293313 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 536-692 |
| Cow position: | chr28:4066669-4066516 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 92 |
| Conread position: | 536-695 |
| Cow position: | chr28:611937-611780 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 64 |
| Conread position: | 536-695 |
| Cow position: | chr28:4118774-4118935 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 64, 153 |
| Conread position: | 536-695 |
| Cow position: | chr28:14064126-14063964 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 130 |
| Conread position: | 536-695 |
| Cow position: | chr28:19294633-19294797 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 536-695 |
| Cow position: | chr28:24192896-24193062 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 536-695 |
| Cow position: | chr28:30309551-30309711 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 536-698 |
| Cow position: | chr28:31371533-31371695 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 537-793 |
| Cow position: | chr28:24563982-24563726 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 538-693 |
| Cow position: | chr28:10069239-10069396 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 538-696 |
| Cow position: | chr28:33200644-33200485 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 538-698 |
| Cow position: | chr28:33854194-33854032 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 543-695 |
| Cow position: | chr28:3724724-3724877 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 543-695 |
| Cow position: | chr28:17212183-17212030 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 543-695 |
| Cow position: | chr28:23167362-23167521 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 548-682 |
| Cow position: | chr28:17291217-17291080 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 558-698 |
| Cow position: | chr28:31945940-31945802 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 600-698 |
| Cow position: | chr28:20811203-20811105 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.